Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 BET1L-204ENST00000410108 637 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 AC073210.2-201ENST00000430369 194 ntBASIC11.74□□□□□ -0.53
LINC00575Q6W349 HES2-206ENST00000489730 730 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 AC142381.2-201ENST00000566120 298 ntBASIC11.74□□□□□ -0.53
LINC00575Q6W349 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 RCC2P6-201ENST00000526625 1557 ntBASIC11.74□□□□□ -0.53
LINC00575Q6W349 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00575Q6W349 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00575Q6W349 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 AC008556.1-201ENST00000610908 2040 ntBASIC11.72□□□□□ -0.53
LINC00575Q6W349 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 PKD1P5-201ENST00000532415 10291 ntBASIC11.72□□□□□ -0.53
LINC00575Q6W349 AL023806.1-201ENST00000603994 1649 ntBASIC11.72□□□□□ -0.53
LINC00575Q6W349 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.72□□□□□ -0.53
LINC00575Q6W349 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 JTB-203ENST00000368589 1216 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 KRT18P11-201ENST00000435214 1283 ntBASIC11.72□□□□□ -0.53
LINC00575Q6W349 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms