Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PRPHP41219 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.91■□□□□ 0.94
PRPHP41219 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
PRPHP41219 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPHP41219 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PRPHP41219 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 ECEL1P3-201ENST00000427961 737 ntBASIC20.91■□□□□ 0.94
PRPHP41219 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.91■□□□□ 0.94
PRPHP41219 AC009947.2-201ENST00000444014 672 ntBASIC20.91■□□□□ 0.94
PRPHP41219 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.91■□□□□ 0.94
PRPHP41219 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PRPHP41219 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRPHP41219 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PRPHP41219 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PRPHP41219 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
PRPHP41219 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PRPHP41219 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.9■□□□□ 0.94
PRPHP41219 SLC25A3P1-201ENST00000443844 931 ntBASIC20.9■□□□□ 0.94
PRPHP41219 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.9■□□□□ 0.94
PRPHP41219 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PRPHP41219 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.9■□□□□ 0.94
PRPHP41219 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 AC135050.7-201ENST00000624508 2218 ntBASIC20.9■□□□□ 0.94
PRPHP41219 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PRPHP41219 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PRPHP41219 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRPHP41219 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRPHP41219 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PRPHP41219 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPHP41219 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.89■□□□□ 0.93
PRPHP41219 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPHP41219 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRPHP41219 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.89■□□□□ 0.93
PRPHP41219 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRPHP41219 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PRPHP41219 AL138966.2-201ENST00000621997 464 ntBASIC20.89■□□□□ 0.93
PRPHP41219 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.89■□□□□ 0.93
PRPHP41219 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.89■□□□□ 0.93
PRPHP41219 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPHP41219 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.89■□□□□ 0.93
PRPHP41219 HCG11-201ENST00000411553 5696 ntBASIC20.89■□□□□ 0.93
PRPHP41219 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.89■□□□□ 0.93
PRPHP41219 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRPHP41219 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPHP41219 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRPHP41219 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PRPHP41219 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PRPHP41219 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
PRPHP41219 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PRPHP41219 MIR149-201ENST00000384879 89 ntBASIC20.88■□□□□ 0.93
PRPHP41219 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPHP41219 SEC1P-202ENST00000473944 940 ntBASIC20.88■□□□□ 0.93
PRPHP41219 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.88■□□□□ 0.93
PRPHP41219 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.88■□□□□ 0.93
PRPHP41219 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.88■□□□□ 0.93
PRPHP41219 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.88■□□□□ 0.93
PRPHP41219 AC133561.5-201ENST00000635547 218 ntBASIC20.88■□□□□ 0.93
PRPHP41219 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
PRPHP41219 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPHP41219 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPHP41219 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPHP41219 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRPHP41219 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.88■□□□□ 0.93
PRPHP41219 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms