Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MT-ND3P03897 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND3P03897 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND3P03897 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MT-ND3P03897 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND3P03897 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.89■□□□□ 0.61
MT-ND3P03897 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
MT-ND3P03897 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND3P03897 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
MT-ND3P03897 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
MT-ND3P03897 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.89■□□□□ 0.61
MT-ND3P03897 AC211429.1-201ENST00000415277 523 ntBASIC18.89■□□□□ 0.61
MT-ND3P03897 ECEL1P3-201ENST00000427961 737 ntBASIC18.89■□□□□ 0.61
MT-ND3P03897 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.89■□□□□ 0.61
MT-ND3P03897 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.89■□□□□ 0.61
MT-ND3P03897 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND3P03897 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND3P03897 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.89■□□□□ 0.61
MT-ND3P03897 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND3P03897 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND3P03897 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.89■□□□□ 0.61
MT-ND3P03897 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
MT-ND3P03897 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MT-ND3P03897 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
MT-ND3P03897 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.88■□□□□ 0.61
MT-ND3P03897 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-ND3P03897 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.88■□□□□ 0.61
MT-ND3P03897 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND3P03897 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 FZD10-202ENST00000539839 3282 ntBASIC18.87■□□□□ 0.61
MT-ND3P03897 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-ND3P03897 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MT-ND3P03897 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MT-ND3P03897 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-ND3P03897 AL355355.2-201ENST00000442321 338 ntBASIC18.87■□□□□ 0.61
MT-ND3P03897 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.87■□□□□ 0.61
MT-ND3P03897 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.87■□□□□ 0.61
MT-ND3P03897 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-ND3P03897 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.87■□□□□ 0.61
MT-ND3P03897 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.87■□□□□ 0.61
MT-ND3P03897 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MT-ND3P03897 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.87■□□□□ 0.61
MT-ND3P03897 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.87■□□□□ 0.61
MT-ND3P03897 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.87■□□□□ 0.61
MT-ND3P03897 AF186192.3-201ENST00000583427 947 ntBASIC18.87■□□□□ 0.61
MT-ND3P03897 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.87■□□□□ 0.61
MT-ND3P03897 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-ND3P03897 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-ND3P03897 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.87■□□□□ 0.61
MT-ND3P03897 HEIH-201ENST00000623091 1652 ntBASIC18.87■□□□□ 0.61
MT-ND3P03897 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND3P03897 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MT-ND3P03897 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-ND3P03897 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.86■□□□□ 0.61
MT-ND3P03897 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-ND3P03897 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MT-ND3P03897 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.86■□□□□ 0.61
MT-ND3P03897 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.86■□□□□ 0.61
MT-ND3P03897 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.86■□□□□ 0.61
MT-ND3P03897 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.86■□□□□ 0.61
MT-ND3P03897 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MT-ND3P03897 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.86■□□□□ 0.61
MT-ND3P03897 AC026471.5-201ENST00000615068 467 ntBASIC18.86■□□□□ 0.61
MT-ND3P03897 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND3P03897 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms