Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.53□□□□□ -0.08
TOMM40O96008 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.53□□□□□ -0.08
TOMM40O96008 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TOMM40O96008 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TOMM40O96008 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.53□□□□□ -0.08
TOMM40O96008 ABALON-201ENST00000629058 1903 ntBASIC14.53□□□□□ -0.08
TOMM40O96008 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.52□□□□□ -0.08
TOMM40O96008 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TOMM40O96008 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.52□□□□□ -0.08
TOMM40O96008 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.52□□□□□ -0.08
TOMM40O96008 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TOMM40O96008 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
TOMM40O96008 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TOMM40O96008 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.52□□□□□ -0.09
TOMM40O96008 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.52□□□□□ -0.09
TOMM40O96008 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.52□□□□□ -0.09
TOMM40O96008 AC011298.2-201ENST00000617989 482 ntBASIC14.52□□□□□ -0.09
TOMM40O96008 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.52□□□□□ -0.09
TOMM40O96008 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 AL031985.4-201ENST00000642138 673 ntBASIC14.52□□□□□ -0.09
TOMM40O96008 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.52□□□□□ -0.09
TOMM40O96008 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.52□□□□□ -0.09
TOMM40O96008 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.52□□□□□ -0.09
TOMM40O96008 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.52□□□□□ -0.09
TOMM40O96008 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TOMM40O96008 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
TOMM40O96008 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TOMM40O96008 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TOMM40O96008 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.51□□□□□ -0.09
TOMM40O96008 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.51□□□□□ -0.09
TOMM40O96008 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.51□□□□□ -0.09
TOMM40O96008 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.51□□□□□ -0.09
TOMM40O96008 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TOMM40O96008 AL513477.1-201ENST00000602865 2407 ntBASIC14.51□□□□□ -0.09
TOMM40O96008 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.51□□□□□ -0.09
TOMM40O96008 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TOMM40O96008 AC128676.1-201ENST00000454392 318 ntBASIC14.51□□□□□ -0.09
TOMM40O96008 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.51□□□□□ -0.09
TOMM40O96008 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.51□□□□□ -0.09
TOMM40O96008 C1QBPP2-201ENST00000528754 825 ntBASIC14.51□□□□□ -0.09
TOMM40O96008 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.51□□□□□ -0.09
TOMM40O96008 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.51□□□□□ -0.09
TOMM40O96008 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.51□□□□□ -0.09
TOMM40O96008 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TOMM40O96008 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms