Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 AC112907.2-201ENST00000448639 330 ntBASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB9Q9Y5E1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 CROCCP3-202ENST00000420820 1947 ntBASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 TNXA-203ENST00000507684 2038 ntBASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 ZNF444P1-201ENST00000559497 298 ntBASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 Z98044.1-201ENST00000632503 1764 ntBASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB9Q9Y5E1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 KRT18P38-201ENST00000449496 1282 ntBASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHB9Q9Y5E1 NEK4P2-201ENST00000580004 1012 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms