Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMC1Q8TDI8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.79■■□□□ 1.72
TMC1Q8TDI8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
TMC1Q8TDI8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMC1Q8TDI8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMC1Q8TDI8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMC1Q8TDI8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TMC1Q8TDI8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC25.76■■□□□ 1.72
TMC1Q8TDI8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.72
TMC1Q8TDI8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
TMC1Q8TDI8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC25.76■■□□□ 1.72
TMC1Q8TDI8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC25.76■■□□□ 1.71
TMC1Q8TDI8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 HCG4P8-203ENST00000443049 980 ntBASIC25.75■■□□□ 1.71
TMC1Q8TDI8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC25.75■■□□□ 1.71
TMC1Q8TDI8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 AC068587.9-201ENST00000641814 219 ntBASIC25.75■■□□□ 1.71
TMC1Q8TDI8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMC1Q8TDI8 CROCCP3-202ENST00000420820 1947 ntBASIC25.75■■□□□ 1.71
TMC1Q8TDI8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 AC104390.1-201ENST00000555663 520 ntBASIC25.74■■□□□ 1.71
TMC1Q8TDI8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 AC010240.3-201ENST00000607688 395 ntBASIC25.74■■□□□ 1.71
TMC1Q8TDI8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 AL391807.1-203ENST00000604392 2365 ntBASIC25.74■■□□□ 1.71
TMC1Q8TDI8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMC1Q8TDI8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms