Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 AC138028.4-201ENST00000564984 1845 ntBASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP4Q6PIL6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 AC027612.3-201ENST00000413684 1047 ntBASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 CDV3P1-201ENST00000471403 739 ntBASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 AC011676.5-201ENST00000624864 2660 ntBASIC14.37□□□□□ -0.11
KCNIP4Q6PIL6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
KCNIP4Q6PIL6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms