Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CBX1P83916 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.43■□□□□ 0.7
CBX1P83916 AC093677.2-201ENST00000600169 1863 ntBASIC19.43■□□□□ 0.7
CBX1P83916 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.43■□□□□ 0.7
CBX1P83916 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX1P83916 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.43■□□□□ 0.7
CBX1P83916 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.43■□□□□ 0.7
CBX1P83916 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX1P83916 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.42■□□□□ 0.7
CBX1P83916 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CBX1P83916 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CBX1P83916 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.42■□□□□ 0.7
CBX1P83916 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.42■□□□□ 0.7
CBX1P83916 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 MIR6724-1-201ENST00000616420 92 ntBASIC19.42■□□□□ 0.7
CBX1P83916 MIR6724-2-201ENST00000616483 92 ntBASIC19.42■□□□□ 0.7
CBX1P83916 MIR6724-4-201ENST00000617390 92 ntBASIC19.42■□□□□ 0.7
CBX1P83916 MIR6724-3-201ENST00000622482 92 ntBASIC19.42■□□□□ 0.7
CBX1P83916 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.42■□□□□ 0.7
CBX1P83916 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.42■□□□□ 0.7
CBX1P83916 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.42■□□□□ 0.7
CBX1P83916 AC005224.4-201ENST00000583262 1652 ntBASIC19.42■□□□□ 0.7
CBX1P83916 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
CBX1P83916 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.42■□□□□ 0.7
CBX1P83916 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 AL662844.4-201ENST00000606367 2838 ntBASIC19.42■□□□□ 0.7
CBX1P83916 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.42■□□□□ 0.7
CBX1P83916 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX1P83916 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CBX1P83916 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CBX1P83916 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CBX1P83916 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.41■□□□□ 0.7
CBX1P83916 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.41■□□□□ 0.7
CBX1P83916 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CBX1P83916 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.41■□□□□ 0.7
CBX1P83916 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.41■□□□□ 0.7
CBX1P83916 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.41■□□□□ 0.7
CBX1P83916 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CBX1P83916 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX1P83916 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CBX1P83916 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CBX1P83916 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
CBX1P83916 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CBX1P83916 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX1P83916 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.4■□□□□ 0.7
CBX1P83916 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX1P83916 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX1P83916 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CBX1P83916 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CBX1P83916 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms