Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.55■□□□□ 0.24
ACTA1P68133 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ACTA1P68133 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
ACTA1P68133 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.55■□□□□ 0.24
ACTA1P68133 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.55■□□□□ 0.24
ACTA1P68133 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.55■□□□□ 0.24
ACTA1P68133 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ACTA1P68133 AC098934.4-201ENST00000564127 592 ntBASIC16.55■□□□□ 0.24
ACTA1P68133 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.55■□□□□ 0.24
ACTA1P68133 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.55■□□□□ 0.24
ACTA1P68133 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.55■□□□□ 0.24
ACTA1P68133 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ACTA1P68133 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.55■□□□□ 0.24
ACTA1P68133 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.55■□□□□ 0.24
ACTA1P68133 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.55■□□□□ 0.24
ACTA1P68133 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.55■□□□□ 0.24
ACTA1P68133 AC008556.1-201ENST00000610908 2040 ntBASIC16.55■□□□□ 0.24
ACTA1P68133 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ACTA1P68133 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.55■□□□□ 0.24
ACTA1P68133 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ACTA1P68133 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ACTA1P68133 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ACTA1P68133 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 AC069152.1-201ENST00000438030 544 ntBASIC16.54■□□□□ 0.24
ACTA1P68133 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.54■□□□□ 0.24
ACTA1P68133 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 AC134043.2-201ENST00000624206 2238 ntBASIC16.54■□□□□ 0.24
ACTA1P68133 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
ACTA1P68133 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ACTA1P68133 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ACTA1P68133 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
ACTA1P68133 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ACTA1P68133 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.53■□□□□ 0.24
ACTA1P68133 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.53■□□□□ 0.24
ACTA1P68133 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ACTA1P68133 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.53■□□□□ 0.24
ACTA1P68133 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ACTA1P68133 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ACTA1P68133 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.53■□□□□ 0.24
ACTA1P68133 MYLKP1-201ENST00000509077 1580 ntBASIC16.53■□□□□ 0.24
ACTA1P68133 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.53■□□□□ 0.24
ACTA1P68133 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ACTA1P68133 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.53■□□□□ 0.24
ACTA1P68133 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.53■□□□□ 0.24
ACTA1P68133 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.53■□□□□ 0.24
ACTA1P68133 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.53■□□□□ 0.24
ACTA1P68133 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ACTA1P68133 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.53■□□□□ 0.24
ACTA1P68133 AC142086.2-201ENST00000569753 217 ntBASIC16.53■□□□□ 0.24
ACTA1P68133 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.53■□□□□ 0.24
ACTA1P68133 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
ACTA1P68133 AL445675.2-201ENST00000620291 557 ntBASIC16.53■□□□□ 0.24
ACTA1P68133 AC131212.4-201ENST00000623606 975 ntBASIC16.53■□□□□ 0.24
ACTA1P68133 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.53■□□□□ 0.24
ACTA1P68133 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ACTA1P68133 FLJ13224-201ENST00000313737 1514 ntBASIC16.53■□□□□ 0.24
ACTA1P68133 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ACTA1P68133 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ACTA1P68133 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ACTA1P68133 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms