Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 PNMA6B-201ENST00000538162 1200 ntBASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-6A0A0B4J262 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV8-6A0A0B4J262 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms