Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL512353.2-201ENST00000448759 1962 ntBASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 TPM4P1-201ENST00000436100 807 ntBASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 AL023973.1-201ENST00000624619 620 ntBASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB11Q9Y5F2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB11Q9Y5F2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 KRT8P32-201ENST00000512863 1461 ntBASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB11Q9Y5F2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms