Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 TUBB8P6-201ENST00000436895 1288 ntBASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 AC008894.3-201ENST00000624324 3103 ntBASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 CROCCP1-201ENST00000426910 5675 ntBASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 TSPY23P-201ENST00000440136 739 ntBASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 AL121906.2-201ENST00000621597 723 ntBASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 AC006557.6-201ENST00000623071 864 ntBASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RCL1Q9Y2P8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 AC080080.1-201ENST00000625121 2420 ntBASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms