Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.67■□□□□ 0.74
CALR3Q96L12 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 AC011298.2-201ENST00000617989 482 ntBASIC19.67■□□□□ 0.74
CALR3Q96L12 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CALR3Q96L12 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.67■□□□□ 0.74
CALR3Q96L12 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.66■□□□□ 0.74
CALR3Q96L12 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.66■□□□□ 0.74
CALR3Q96L12 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.66■□□□□ 0.74
CALR3Q96L12 FAM207BP-201ENST00000447172 505 ntBASIC19.66■□□□□ 0.74
CALR3Q96L12 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.66■□□□□ 0.74
CALR3Q96L12 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.66■□□□□ 0.74
CALR3Q96L12 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.66■□□□□ 0.74
CALR3Q96L12 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CALR3Q96L12 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 AC093677.2-201ENST00000600169 1863 ntBASIC19.66■□□□□ 0.74
CALR3Q96L12 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.66■□□□□ 0.74
CALR3Q96L12 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.66■□□□□ 0.74
CALR3Q96L12 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.66■□□□□ 0.74
CALR3Q96L12 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALR3Q96L12 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALR3Q96L12 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALR3Q96L12 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALR3Q96L12 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CALR3Q96L12 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALR3Q96L12 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALR3Q96L12 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.65■□□□□ 0.74
CALR3Q96L12 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALR3Q96L12 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.65■□□□□ 0.74
CALR3Q96L12 KRT18P6-201ENST00000555540 1265 ntBASIC19.65■□□□□ 0.74
CALR3Q96L12 AC073195.1-201ENST00000607241 877 ntBASIC19.65■□□□□ 0.74
CALR3Q96L12 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.65■□□□□ 0.74
CALR3Q96L12 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CALR3Q96L12 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALR3Q96L12 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CALR3Q96L12 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALR3Q96L12 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.65■□□□□ 0.74
CALR3Q96L12 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.65■□□□□ 0.74
CALR3Q96L12 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALR3Q96L12 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.64■□□□□ 0.74
CALR3Q96L12 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CALR3Q96L12 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALR3Q96L12 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALR3Q96L12 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALR3Q96L12 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.64■□□□□ 0.74
CALR3Q96L12 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALR3Q96L12 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CALR3Q96L12 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALR3Q96L12 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALR3Q96L12 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CALR3Q96L12 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.64■□□□□ 0.73
CALR3Q96L12 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALR3Q96L12 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CALR3Q96L12 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.64■□□□□ 0.73
CALR3Q96L12 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CALR3Q96L12 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.64■□□□□ 0.73
CALR3Q96L12 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CALR3Q96L12 RARRES2P10-201ENST00000564312 460 ntBASIC19.64■□□□□ 0.73
CALR3Q96L12 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.64■□□□□ 0.73
CALR3Q96L12 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.64■□□□□ 0.73
CALR3Q96L12 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.64■□□□□ 0.73
CALR3Q96L12 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CALR3Q96L12 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CALR3Q96L12 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.64■□□□□ 0.73
CALR3Q96L12 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CALR3Q96L12 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CALR3Q96L12 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 ESPNP-201ENST00000270691 2015 ntBASIC19.63■□□□□ 0.73
CALR3Q96L12 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALR3Q96L12 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms