Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
C11orf88Q6PI97 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 ABALON-201ENST00000629058 1903 ntBASIC16.17■□□□□ 0.18
C11orf88Q6PI97 PRORSD1P-202ENST00000563365 2154 ntBASIC16.17■□□□□ 0.18
C11orf88Q6PI97 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 KRT17P3-201ENST00000420566 1262 ntBASIC16.17■□□□□ 0.18
C11orf88Q6PI97 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 AC142381.4-202ENST00000563973 229 ntBASIC16.17■□□□□ 0.18
C11orf88Q6PI97 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C11orf88Q6PI97 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms