Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB4AP20338 AC087633.2-202ENST00000565166 1439 ntBASIC14.24□□□□□ -0.13
RAB4AP20338 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB4AP20338 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB4AP20338 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
RAB4AP20338 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB4AP20338 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB4AP20338 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB4AP20338 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB4AP20338 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.23□□□□□ -0.13
RAB4AP20338 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.23□□□□□ -0.13
RAB4AP20338 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB4AP20338 AP001160.3-201ENST00000601484 763 ntBASIC14.23□□□□□ -0.13
RAB4AP20338 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB4AP20338 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB4AP20338 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB4AP20338 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
RAB4AP20338 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB4AP20338 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB4AP20338 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RAB4AP20338 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB4AP20338 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RAB4AP20338 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB4AP20338 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB4AP20338 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB4AP20338 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB4AP20338 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 RASA4CP-201ENST00000424092 1398 ntBASIC14.22□□□□□ -0.13
RAB4AP20338 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB4AP20338 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB4AP20338 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB4AP20338 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB4AP20338 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB4AP20338 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB4AP20338 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.22□□□□□ -0.13
RAB4AP20338 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.22□□□□□ -0.13
RAB4AP20338 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
RAB4AP20338 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB4AP20338 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB4AP20338 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB4AP20338 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB4AP20338 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB4AP20338 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB4AP20338 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB4AP20338 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB4AP20338 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms