Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AL031985.4-201ENST00000642138 673 ntBASIC19.26■□□□□ 0.67
IFNB1P01574 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IFNB1P01574 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFNB1P01574 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
IFNB1P01574 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFNB1P01574 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
IFNB1P01574 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFNB1P01574 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 AL357033.4-201ENST00000617703 1807 ntBASIC19.25■□□□□ 0.67
IFNB1P01574 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
IFNB1P01574 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.25■□□□□ 0.67
IFNB1P01574 NOC2LP1-202ENST00000452600 2235 ntBASIC19.25■□□□□ 0.67
IFNB1P01574 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.25■□□□□ 0.67
IFNB1P01574 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.25■□□□□ 0.67
IFNB1P01574 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IFNB1P01574 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
IFNB1P01574 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
IFNB1P01574 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
IFNB1P01574 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
IFNB1P01574 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.25■□□□□ 0.67
IFNB1P01574 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.25■□□□□ 0.67
IFNB1P01574 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.25■□□□□ 0.67
IFNB1P01574 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.25■□□□□ 0.67
IFNB1P01574 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.25■□□□□ 0.67
IFNB1P01574 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IFNB1P01574 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.25■□□□□ 0.67
IFNB1P01574 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNB1P01574 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.25■□□□□ 0.67
IFNB1P01574 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.25■□□□□ 0.67
IFNB1P01574 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.24■□□□□ 0.67
IFNB1P01574 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
IFNB1P01574 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IFNB1P01574 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.24■□□□□ 0.67
IFNB1P01574 AC008040.2-201ENST00000461049 708 ntBASIC19.24■□□□□ 0.67
IFNB1P01574 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.24■□□□□ 0.67
IFNB1P01574 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.24■□□□□ 0.67
IFNB1P01574 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.24■□□□□ 0.67
IFNB1P01574 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.24■□□□□ 0.67
IFNB1P01574 AF186192.3-201ENST00000583427 947 ntBASIC19.24■□□□□ 0.67
IFNB1P01574 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.24■□□□□ 0.67
IFNB1P01574 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
IFNB1P01574 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.24■□□□□ 0.67
IFNB1P01574 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.24■□□□□ 0.67
IFNB1P01574 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.24■□□□□ 0.67
IFNB1P01574 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNB1P01574 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
IFNB1P01574 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IFNB1P01574 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.23■□□□□ 0.67
IFNB1P01574 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
IFNB1P01574 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.23■□□□□ 0.67
IFNB1P01574 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
IFNB1P01574 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.23■□□□□ 0.67
IFNB1P01574 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.23■□□□□ 0.67
IFNB1P01574 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.23■□□□□ 0.67
IFNB1P01574 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.23■□□□□ 0.67
IFNB1P01574 AC026271.3-201ENST00000571884 352 ntBASIC19.23■□□□□ 0.67
IFNB1P01574 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.23■□□□□ 0.67
IFNB1P01574 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 FAM197Y4-202ENST00000622692 608 ntBASIC19.23■□□□□ 0.67
IFNB1P01574 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
IFNB1P01574 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNB1P01574 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
IFNB1P01574 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
IFNB1P01574 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
IFNB1P01574 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFNB1P01574 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms