Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 AC090192.1-201ENST00000517740 490 ntBASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 KRT18P41-201ENST00000518924 1277 ntBASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 AL353708.3-201ENST00000610272 989 ntBASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 AC020916.1-201ENST00000587762 1774 ntBASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPPED1Q9BRF8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CPPED1Q9BRF8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPPED1Q9BRF8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPPED1Q9BRF8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPPED1Q9BRF8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPPED1Q9BRF8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPPED1Q9BRF8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.52■□□□□ 0.39
CPPED1Q9BRF8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 SLC25A6P5-201ENST00000435663 894 ntBASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 CKBP1-201ENST00000565489 1086 ntBASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 AC110285.5-201ENST00000611501 352 ntBASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPPED1Q9BRF8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 GNAS-203ENST00000306120 1878 ntBASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 HLA-L-209ENST00000420110 1011 ntBASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 KSR1P1-201ENST00000446298 240 ntBASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 AC008040.2-201ENST00000461049 708 ntBASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 AP002982.1-201ENST00000492365 877 ntBASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPPED1Q9BRF8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 REXO1L9P-201ENST00000604264 2108 ntBASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 AC011298.2-201ENST00000617989 482 ntBASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 AC134043.2-201ENST00000624206 2238 ntBASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPPED1Q9BRF8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms