Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GMDSO60547 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GMDSO60547 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.48■□□□□ 0.23
GMDSO60547 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.48■□□□□ 0.23
GMDSO60547 UBE2SP1-201ENST00000450587 669 ntBASIC16.48■□□□□ 0.23
GMDSO60547 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.48■□□□□ 0.23
GMDSO60547 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.48■□□□□ 0.23
GMDSO60547 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GMDSO60547 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.48■□□□□ 0.23
GMDSO60547 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.48■□□□□ 0.23
GMDSO60547 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.48■□□□□ 0.23
GMDSO60547 AL353708.3-201ENST00000610272 989 ntBASIC16.48■□□□□ 0.23
GMDSO60547 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GMDSO60547 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GMDSO60547 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.48■□□□□ 0.23
GMDSO60547 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.48■□□□□ 0.23
GMDSO60547 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.48■□□□□ 0.23
GMDSO60547 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GMDSO60547 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GMDSO60547 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GMDSO60547 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.48■□□□□ 0.23
GMDSO60547 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GMDSO60547 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GMDSO60547 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 HTR7P1-201ENST00000538670 1336 ntBASIC16.47■□□□□ 0.23
GMDSO60547 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.47■□□□□ 0.23
GMDSO60547 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
GMDSO60547 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.47■□□□□ 0.23
GMDSO60547 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
GMDSO60547 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
GMDSO60547 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.47■□□□□ 0.23
GMDSO60547 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GMDSO60547 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.47■□□□□ 0.23
GMDSO60547 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.47■□□□□ 0.23
GMDSO60547 GCSHP5-201ENST00000443090 522 ntBASIC16.47■□□□□ 0.23
GMDSO60547 AP002982.1-201ENST00000492365 877 ntBASIC16.47■□□□□ 0.23
GMDSO60547 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.47■□□□□ 0.23
GMDSO60547 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.47■□□□□ 0.23
GMDSO60547 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.47■□□□□ 0.23
GMDSO60547 TMEM191A-211ENST00000637163 1067 ntBASIC16.47■□□□□ 0.23
GMDSO60547 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.47■□□□□ 0.23
GMDSO60547 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.47■□□□□ 0.23
GMDSO60547 FEM1AP3-201ENST00000403722 1741 ntBASIC16.47■□□□□ 0.23
GMDSO60547 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
GMDSO60547 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.47■□□□□ 0.23
GMDSO60547 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.47■□□□□ 0.23
GMDSO60547 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.47■□□□□ 0.23
GMDSO60547 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GMDSO60547 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
GMDSO60547 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.46■□□□□ 0.23
GMDSO60547 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GMDSO60547 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.46■□□□□ 0.23
GMDSO60547 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.46■□□□□ 0.23
GMDSO60547 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.46■□□□□ 0.23
GMDSO60547 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
GMDSO60547 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 NIFKP9-201ENST00000419265 221 ntBASIC16.46■□□□□ 0.23
GMDSO60547 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.46■□□□□ 0.23
GMDSO60547 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.46■□□□□ 0.23
GMDSO60547 AL160286.2-201ENST00000567150 934 ntBASIC16.46■□□□□ 0.23
GMDSO60547 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.46■□□□□ 0.23
GMDSO60547 HLA-A-209ENST00000638375 975 ntBASIC16.46■□□□□ 0.23
GMDSO60547 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.46■□□□□ 0.23
GMDSO60547 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
GMDSO60547 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.46■□□□□ 0.23
GMDSO60547 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GMDSO60547 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GMDSO60547 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms