Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 TREX1-205ENST00000625293 1783 ntBASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 AL138781.2-201ENST00000617896 1843 ntBASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TMX2-CTNND1H3BSU7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMX2-CTNND1H3BSU7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 HCG4P8-203ENST00000443049 980 ntBASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 KRT18P38-201ENST00000449496 1282 ntBASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC034232.1-201ENST00000506026 1064 ntBASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMX2-CTNND1H3BSU7 LINC01311-201ENST00000565162 1445 ntBASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 AL032819.2-201ENST00000624543 2162 ntBASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 GCSHP2-201ENST00000560971 527 ntBASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms