Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 AL158047.1-201ENST00000445918 881 ntBASIC17.64■□□□□ 0.41
GPC6Q9Y625 UBE2SP1-201ENST00000450587 669 ntBASIC17.64■□□□□ 0.41
GPC6Q9Y625 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
GPC6Q9Y625 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC6Q9Y625 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 AL353807.1-201ENST00000427475 662 ntBASIC17.63■□□□□ 0.41
GPC6Q9Y625 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 AC090164.3-201ENST00000610780 2143 ntBASIC17.63■□□□□ 0.41
GPC6Q9Y625 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GPC6Q9Y625 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC6Q9Y625 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 KRT8P41-201ENST00000533985 1514 ntBASIC17.62■□□□□ 0.41
GPC6Q9Y625 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 ANO7L1-203ENST00000602586 1720 ntBASIC17.62■□□□□ 0.41
GPC6Q9Y625 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 RARRES2P10-201ENST00000564312 460 ntBASIC17.62■□□□□ 0.41
GPC6Q9Y625 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC6Q9Y625 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GPC6Q9Y625 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms