Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCDHB11Q9Y5F2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB11Q9Y5F2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB11Q9Y5F2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB11Q9Y5F2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB11Q9Y5F2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PCDHB11Q9Y5F2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB11Q9Y5F2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 AP000523.1-201ENST00000398242 1049 ntBASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 IER3-202ENST00000376377 1350 ntBASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB11Q9Y5F2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 KRT18P48-201ENST00000434763 852 ntBASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 KRT126P-201ENST00000549467 1181 ntBASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB11Q9Y5F2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 AC006333.2-201ENST00000607957 2099 ntBASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 AC093458.2-201ENST00000623150 629 ntBASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB11Q9Y5F2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms