Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEK1Q96PY6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NEK1Q96PY6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEK1Q96PY6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEK1Q96PY6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 AC036111.1-201ENST00000533973 1582 ntBASIC22.05■■□□□ 1.12
NEK1Q96PY6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEK1Q96PY6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NEK1Q96PY6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 NAPSB-206ENST00000562112 1266 ntBASIC22.05■■□□□ 1.12
NEK1Q96PY6 AC073912.3-201ENST00000624414 853 ntBASIC22.05■■□□□ 1.12
NEK1Q96PY6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEK1Q96PY6 AC034236.2-201ENST00000606662 1610 ntBASIC22.05■■□□□ 1.12
NEK1Q96PY6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NEK1Q96PY6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
NEK1Q96PY6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEK1Q96PY6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 MYLKP1-201ENST00000509077 1580 ntBASIC22.04■■□□□ 1.12
NEK1Q96PY6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 CR769767.2-201ENST00000622735 460 ntBASIC22.04■■□□□ 1.12
NEK1Q96PY6 AC010653.2-201ENST00000623505 997 ntBASIC22.04■■□□□ 1.12
NEK1Q96PY6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
NEK1Q96PY6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEK1Q96PY6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
NEK1Q96PY6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NEK1Q96PY6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.02■■□□□ 1.12
NEK1Q96PY6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.02■■□□□ 1.12
NEK1Q96PY6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms