Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 Z82202.1-201ENST00000623446 1880 ntBASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 SNX5-217ENST00000606557 1087 ntBASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SPTSSBQ8NFR3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms