Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 HYI-210ENST00000486909 905 ntTSL 5 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 CEP120-209ENST00000515110 606 ntTSL 3 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 FLJ13224-201ENST00000313737 1514 ntBASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST3H2BBQ8N257 AC099063.4-201ENST00000641099 1602 ntBASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 CLTA-210ENST00000540080 989 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 AL603756.1-201ENST00000606511 2163 ntBASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 LYSMD4-203ENST00000378904 2122 ntBASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST3H2BBQ8N257 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST3H2BBQ8N257 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms