Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 TERF1P1-201ENST00000311003 1181 ntBASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 AC005521.1-201ENST00000393351 872 ntBASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 WWOX-216ENST00000569818 525 ntBASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 AL031598.1-201ENST00000561511 1773 ntBASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
LYSMD3Q7Z3D4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 MIR564-202ENST00000385049 94 ntBASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 AL137013.1-201ENST00000432946 1228 ntBASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LYSMD3Q7Z3D4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 LIN28AP1-201ENST00000429574 405 ntBASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 AC009947.2-201ENST00000444014 672 ntBASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 ANO7L1-203ENST00000602586 1720 ntBASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 AC092865.7-201ENST00000641832 219 ntBASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 Z98044.1-201ENST00000632503 1764 ntBASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.7■□□□□ 0.58
LYSMD3Q7Z3D4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD3Q7Z3D4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms