Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 AC019069.1-201ENST00000610008 1333 ntBASIC14.11□□□□□ -0.15
MRPL54Q6P161 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.11□□□□□ -0.15
MRPL54Q6P161 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL54Q6P161 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.1□□□□□ -0.15
MRPL54Q6P161 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 SLC7A5P1-201ENST00000568957 537 ntBASIC14.1□□□□□ -0.15
MRPL54Q6P161 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.1□□□□□ -0.15
MRPL54Q6P161 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL54Q6P161 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 AC108860.2-201ENST00000562760 2183 ntBASIC14.09□□□□□ -0.15
MRPL54Q6P161 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MRPL54Q6P161 AC116351.2-201ENST00000606540 1585 ntBASIC14.09□□□□□ -0.15
MRPL54Q6P161 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL54Q6P161 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms