Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)6.69□□□□□ -1.344e-14■□□□□ 11.2
SRSF1Q07955 EIF4A2-204ENST00000429589 1005 ntTSL 56.51□□□□□ -1.374e-14■□□□□ 11.2
SRSF1Q07955 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)6.08□□□□□ -1.444e-14■□□□□ 11.2
SRSF1Q07955 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.524e-14■□□□□ 11.2
SRSF1Q07955 EIF4A2-202ENST00000425053 1977 ntTSL 55.23□□□□□ -1.574e-14■□□□□ 11.2
SRSF1Q07955 EIF4A2-219ENST00000485101 5327 ntTSL 53.37□□□□□ -1.874e-14■□□□□ 11.2
SRSF1Q07955 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11.39□□□□□ -0.598e-8■□□□□ 11.2
SRSF1Q07955 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.788e-8■□□□□ 11.2
SRSF1Q07955 ZNF595-201ENST00000502981 747 ntTSL 29.37□□□□□ -0.918e-8■□□□□ 11.2
SRSF1Q07955 ZNF595-202ENST00000509152 1072 ntTSL 1 (best) BASIC9.37□□□□□ -0.918e-8■□□□□ 11.2
SRSF1Q07955 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.438e-8■□□□□ 11.2
SRSF1Q07955 AL109811.4-202ENST00000611136 700 ntTSL 54.17□□□□□ -1.743e-7■□□□□ 11.2
SRSF1Q07955 SETD6-210ENST00000468223 584 ntTSL 424.83■■□□□ 1.573e-6■□□□□ 11.2
SRSF1Q07955 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.15■■□□□ 1.33e-6■□□□□ 11.2
SRSF1Q07955 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.233e-6■□□□□ 11.2
SRSF1Q07955 TRNP1-202ENST00000531285 575 ntAPPRIS ALT2 TSL 221.41■■□□□ 1.023e-6■□□□□ 11.2
SRSF1Q07955 ITPA-210ENST00000609835 924 ntTSL 1 (best)19.99■□□□□ 0.793e-6■□□□□ 11.2
SRSF1Q07955 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.91■□□□□ 0.783e-6■□□□□ 11.2
SRSF1Q07955 SETD6-204ENST00000418480 829 ntTSL 519.86■□□□□ 0.773e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.71■□□□□ 0.753e-6■□□□□ 11.2
SRSF1Q07955 SETD6-211ENST00000470003 593 ntTSL 219.23■□□□□ 0.673e-6■□□□□ 11.2
SRSF1Q07955 SETD6-205ENST00000422445 1739 ntTSL 519.02■□□□□ 0.633e-6■□□□□ 11.2
SRSF1Q07955 INSIG2-203ENST00000467223 627 ntTSL 518.65■□□□□ 0.583e-6■□□□□ 11.2
SRSF1Q07955 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.12■□□□□ 0.493e-6■□□□□ 11.2
SRSF1Q07955 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.453e-6■□□□□ 11.2
SRSF1Q07955 SETD6-213ENST00000492050 706 ntTSL 317.86■□□□□ 0.453e-6■□□□□ 11.2
SRSF1Q07955 UPF3A-211ENST00000618700 1210 ntTSL 217.52■□□□□ 0.43e-6■□□□□ 11.2
SRSF1Q07955 SETD6-207ENST00000447443 576 ntTSL 517.43■□□□□ 0.383e-6■□□□□ 11.2
SRSF1Q07955 SETD6-206ENST00000427443 1909 ntTSL 1 (best)17.27■□□□□ 0.353e-6■□□□□ 11.2
SRSF1Q07955 KLHDC4-207ENST00000562155 1757 ntTSL 517.18■□□□□ 0.343e-6■□□□□ 11.2
SRSF1Q07955 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.03■□□□□ 0.323e-6■□□□□ 11.2
SRSF1Q07955 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.93■□□□□ 0.36e-13■□□□□ 11.2
SRSF1Q07955 SLC2A1-206ENST00000625233 1031 ntTSL 216.93■□□□□ 0.36e-13■□□□□ 11.2
SRSF1Q07955 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.91■□□□□ 0.33e-6■□□□□ 11.2
SRSF1Q07955 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.283e-6■□□□□ 11.2
SRSF1Q07955 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.263e-6■□□□□ 11.2
SRSF1Q07955 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.68■□□□□ 0.263e-6■□□□□ 11.2
SRSF1Q07955 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.213e-6■□□□□ 11.2
SRSF1Q07955 SLC2A1-202ENST00000415851 578 ntTSL 216.35■□□□□ 0.216e-13■□□□□ 11.2
SRSF1Q07955 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.213e-6■□□□□ 11.2
SRSF1Q07955 INSIG2-202ENST00000411929 574 ntTSL 215.61■□□□□ 0.093e-6■□□□□ 11.2
SRSF1Q07955 SLC2A1-201ENST00000372500 533 ntTSL 315.25■□□□□ 0.036e-13■□□□□ 11.2
SRSF1Q07955 TACC3-208ENST00000484264 551 ntTSL 214.97□□□□□ -0.013e-6■□□□□ 11.2
SRSF1Q07955 COX20-202ENST00000391839 1005 ntTSL 1 (best)14.57□□□□□ -0.083e-6■□□□□ 11.2
SRSF1Q07955 UPF3A-208ENST00000484246 699 ntTSL 314.54□□□□□ -0.083e-6■□□□□ 11.2
SRSF1Q07955 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.123e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.133e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-208ENST00000564547 980 ntTSL 214.17□□□□□ -0.143e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-204ENST00000562792 542 ntTSL 414.17□□□□□ -0.143e-6■□□□□ 11.2
SRSF1Q07955 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.143e-6■□□□□ 11.2
SRSF1Q07955 SLC2A1-209ENST00000630821 591 ntTSL 214.14□□□□□ -0.156e-13■□□□□ 11.2
SRSF1Q07955 CALD1-215ENST00000472096 651 ntTSL 214.01□□□□□ -0.175e-9■□□□□ 11.2
SRSF1Q07955 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.23e-6■□□□□ 11.2
SRSF1Q07955 MPHOSPH10-202ENST00000468427 483 ntTSL 413.72□□□□□ -0.213e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.66□□□□□ -0.223e-6■□□□□ 11.2
SRSF1Q07955 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.37□□□□□ -0.273e-6■□□□□ 11.2
SRSF1Q07955 COX20-205ENST00000498262 2290 ntTSL 212.99□□□□□ -0.333e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC12.94□□□□□ -0.343e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-209ENST00000565205 1084 ntTSL 1 (best)12.68□□□□□ -0.383e-6■□□□□ 11.2
SRSF1Q07955 MYO19-219ENST00000620413 465 ntTSL 212.59□□□□□ -0.396e-9■□□□□ 11.2
SRSF1Q07955 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.45□□□□□ -0.423e-6■□□□□ 11.2
SRSF1Q07955 KLHDC4-218ENST00000567298 4572 ntTSL 512.18□□□□□ -0.463e-6■□□□□ 11.2
SRSF1Q07955 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.16□□□□□ -0.463e-6■□□□□ 11.2
SRSF1Q07955 KLHDC4-216ENST00000566561 564 ntTSL 412.09□□□□□ -0.473e-6■□□□□ 11.2
SRSF1Q07955 KLHDC4-211ENST00000563845 528 ntTSL 412.09□□□□□ -0.473e-6■□□□□ 11.2
SRSF1Q07955 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.97□□□□□ -0.493e-6■□□□□ 11.2
SRSF1Q07955 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.94□□□□□ -0.53e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-210ENST00000565309 699 ntTSL 311.89□□□□□ -0.513e-6■□□□□ 11.2
SRSF1Q07955 SLC2A1-208ENST00000630287 2398 ntTSL 511.58□□□□□ -0.566e-13■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-207ENST00000564404 915 ntTSL 311.54□□□□□ -0.563e-6■□□□□ 11.2
SRSF1Q07955 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.42□□□□□ -0.583e-6■□□□□ 11.2
SRSF1Q07955 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.593e-6■□□□□ 11.2
SRSF1Q07955 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.36□□□□□ -0.593e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-214ENST00000568583 801 ntTSL 3 BASIC11.15□□□□□ -0.623e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-202ENST00000561840 558 ntTSL 5 BASIC11.11□□□□□ -0.633e-6■□□□□ 11.2
SRSF1Q07955 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.06□□□□□ -0.643e-6■□□□□ 11.2
SRSF1Q07955 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.663e-6■□□□□ 11.2
SRSF1Q07955 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.669e-12■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-215ENST00000625770 281 ntTSL 2 BASIC10.85□□□□□ -0.673e-6■□□□□ 11.2
SRSF1Q07955 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC10.68□□□□□ -0.73e-6■□□□□ 11.2
SRSF1Q07955 KLHDC4-206ENST00000561825 562 ntTSL 510.66□□□□□ -0.73e-6■□□□□ 11.2
SRSF1Q07955 HECTD1-213ENST00000556224 3267 ntTSL 510.46□□□□□ -0.743e-6■□□□□ 11.2
SRSF1Q07955 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.813e-6■□□□□ 11.2
SRSF1Q07955 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.823e-6■□□□□ 11.2
SRSF1Q07955 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC9.91□□□□□ -0.823e-6■□□□□ 11.2
SRSF1Q07955 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.896e-13■□□□□ 11.2
SRSF1Q07955 SACS-202ENST00000402364 15134 ntTSL 2 BASIC9.39□□□□□ -0.913e-6■□□□□ 11.2
SRSF1Q07955 ITPA-205ENST00000460676 488 ntTSL 39.09□□□□□ -0.953e-6■□□□□ 11.2
SRSF1Q07955 INSIG2-206ENST00000485520 3185 ntTSL 59.08□□□□□ -0.963e-6■□□□□ 11.2
SRSF1Q07955 MYO19-209ENST00000612097 580 ntTSL 58.88□□□□□ -0.996e-9■□□□□ 11.2
SRSF1Q07955 KLHDC4-220ENST00000568338 584 ntTSL 48.49□□□□□ -1.053e-6■□□□□ 11.2
SRSF1Q07955 ANKMY1-211ENST00000407275 252 ntTSL 37.93□□□□□ -1.143e-6■□□□□ 11.2
SRSF1Q07955 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.223e-6■□□□□ 11.2
SRSF1Q07955 FARP1-224ENST00000598389 747 ntTSL 57.36□□□□□ -1.235e-9■□□□□ 11.2
SRSF1Q07955 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.279e-12■□□□□ 11.2
SRSF1Q07955 INSIG2-204ENST00000471186 2100 ntTSL 57.07□□□□□ -1.283e-6■□□□□ 11.2
SRSF1Q07955 HECTD1-202ENST00000553616 570 ntTSL 25.63□□□□□ -1.513e-6■□□□□ 11.2
SRSF1Q07955 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.043e-6■□□□□ 11.2
SRSF1Q07955 MSH5-219ENST00000497269 764 ntTSL 25.78□□□□□ -1.483e-7■□□□□ 11.1
SRSF1Q07955 KDM6B-203ENST00000570632 1339 ntTSL 515.6■□□□□ 0.091e-7■□□□□ 11.1
Retrieved 100 of 14,836 protein–RNA pairs in 20.6 ms