RNA–Protein interactions for RNA: ENST00000565309.1

TRAPPC2L-210, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-210ENST00000565309 NISCHQ9Y2I1 1504 aa31.52■■■□□ 2.64
TRAPPC2L-210ENST00000565309 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
TRAPPC2L-210ENST00000565309 ABCC9O60706 1549 aa27.25■■□□□ 1.95
TRAPPC2L-210ENST00000565309 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
TRAPPC2L-210ENST00000565309 ZCCHC6Q5VYS8 1495 aaKnown RBP26.28■■□□□ 1.8
TRAPPC2L-210ENST00000565309 NACADO15069 1562 aa26.24■■□□□ 1.79
TRAPPC2L-210ENST00000565309 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
TRAPPC2L-210ENST00000565309 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
TRAPPC2L-210ENST00000565309 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
TRAPPC2L-210ENST00000565309 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.7
TRAPPC2L-210ENST00000565309 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
TRAPPC2L-210ENST00000565309 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
TRAPPC2L-210ENST00000565309 BICRAQ9NZM4 1560 aa25.45■■□□□ 1.66
TRAPPC2L-210ENST00000565309 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
TRAPPC2L-210ENST00000565309 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
TRAPPC2L-210ENST00000565309 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
TRAPPC2L-210ENST00000565309 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.53
TRAPPC2L-210ENST00000565309 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
TRAPPC2L-210ENST00000565309 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
TRAPPC2L-210ENST00000565309 BAZ1AQ9NRL2 1556 aaPredicted RBP24.41■■□□□ 1.5
TRAPPC2L-210ENST00000565309 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
TRAPPC2L-210ENST00000565309 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
TRAPPC2L-210ENST00000565309 SMARCA2P51531 1590 aa24.24■■□□□ 1.47
TRAPPC2L-210ENST00000565309 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
TRAPPC2L-210ENST00000565309 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
TRAPPC2L-210ENST00000565309 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
TRAPPC2L-210ENST00000565309 RSF1Q96T23 1441 aaPredicted RBP24.09■■□□□ 1.45
TRAPPC2L-210ENST00000565309 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
TRAPPC2L-210ENST00000565309 WIZO95785 1651 aa24.05■■□□□ 1.44
TRAPPC2L-210ENST00000565309 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
TRAPPC2L-210ENST00000565309 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.37
TRAPPC2L-210ENST00000565309 NESP48681 1621 aa23.62■■□□□ 1.37
TRAPPC2L-210ENST00000565309 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
TRAPPC2L-210ENST00000565309 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
TRAPPC2L-210ENST00000565309 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
TRAPPC2L-210ENST00000565309 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
TRAPPC2L-210ENST00000565309 CFTRP13569 1480 aa23.42■■□□□ 1.34
TRAPPC2L-210ENST00000565309 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
TRAPPC2L-210ENST00000565309 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
TRAPPC2L-210ENST00000565309 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
TRAPPC2L-210ENST00000565309 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
TRAPPC2L-210ENST00000565309 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
TRAPPC2L-210ENST00000565309 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
TRAPPC2L-210ENST00000565309 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
TRAPPC2L-210ENST00000565309 CUX2O14529 1486 aa23.14■■□□□ 1.29
TRAPPC2L-210ENST00000565309 WDR62O43379 1518 aa23.06■■□□□ 1.28
TRAPPC2L-210ENST00000565309 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
TRAPPC2L-210ENST00000565309 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
TRAPPC2L-210ENST00000565309 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
TRAPPC2L-210ENST00000565309 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
TRAPPC2L-210ENST00000565309 CUX1P39880 1505 aa22.8■■□□□ 1.24
TRAPPC2L-210ENST00000565309 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
TRAPPC2L-210ENST00000565309 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
TRAPPC2L-210ENST00000565309 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
TRAPPC2L-210ENST00000565309 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
TRAPPC2L-210ENST00000565309 SOGA1O94964 1423 aa22.65■■□□□ 1.22
TRAPPC2L-210ENST00000565309 RAD54L2Q9Y4B4 1467 aa22.64■■□□□ 1.21
TRAPPC2L-210ENST00000565309 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
TRAPPC2L-210ENST00000565309 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
TRAPPC2L-210ENST00000565309 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC2L-210ENST00000565309 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
TRAPPC2L-210ENST00000565309 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
TRAPPC2L-210ENST00000565309 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.27e-7■■■□□ 15.5
TRAPPC2L-210ENST00000565309 EIF4G3O43432 1585 aaKnown RBP22.52■■□□□ 1.2
TRAPPC2L-210ENST00000565309 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
TRAPPC2L-210ENST00000565309 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
TRAPPC2L-210ENST00000565309 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
TRAPPC2L-210ENST00000565309 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
TRAPPC2L-210ENST00000565309 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
TRAPPC2L-210ENST00000565309 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
TRAPPC2L-210ENST00000565309 SNAPC4Q5SXM2 1469 aa22.31■■□□□ 1.16
TRAPPC2L-210ENST00000565309 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
TRAPPC2L-210ENST00000565309 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
TRAPPC2L-210ENST00000565309 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
TRAPPC2L-210ENST00000565309 FBLN2P98095 1184 aa22.27■■□□□ 1.16
TRAPPC2L-210ENST00000565309 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC2L-210ENST00000565309 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
TRAPPC2L-210ENST00000565309 KIF27Q86VH2 1401 aa22.22■■□□□ 1.15
TRAPPC2L-210ENST00000565309 CHD1O14646 1710 aa22.21■■□□□ 1.15
TRAPPC2L-210ENST00000565309 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
TRAPPC2L-210ENST00000565309 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
TRAPPC2L-210ENST00000565309 SYNJ2O15056 1496 aa22.19■■□□□ 1.14
TRAPPC2L-210ENST00000565309 ADAMTS12P58397 1594 aa22.13■■□□□ 1.13
TRAPPC2L-210ENST00000565309 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
TRAPPC2L-210ENST00000565309 IGF1RP08069 1367 aa22.12■■□□□ 1.13
TRAPPC2L-210ENST00000565309 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
TRAPPC2L-210ENST00000565309 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
TRAPPC2L-210ENST00000565309 GRIN2AQ12879 1464 aa22.07■■□□□ 1.12
TRAPPC2L-210ENST00000565309 CUL7Q14999 1698 aa22.02■■□□□ 1.12
TRAPPC2L-210ENST00000565309 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
TRAPPC2L-210ENST00000565309 CLASP1Q7Z460 1538 aa21.96■■□□□ 1.11
TRAPPC2L-210ENST00000565309 NUP160Q12769 1436 aa21.95■■□□□ 1.1
TRAPPC2L-210ENST00000565309 CEP170Q5SW79 1584 aa21.95■■□□□ 1.1
TRAPPC2L-210ENST00000565309 RAPGEF2Q9Y4G8 1499 aa21.87■■□□□ 1.09
TRAPPC2L-210ENST00000565309 EEA1Q15075 1411 aa21.87■■□□□ 1.09
TRAPPC2L-210ENST00000565309 ARHGEF11O15085 1522 aa21.86■■□□□ 1.09
TRAPPC2L-210ENST00000565309 FAM9AQ8IZU1 332 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC2L-210ENST00000565309 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
TRAPPC2L-210ENST00000565309 RIMBP3CA6NJZ7 1639 aa21.85■■□□□ 1.09
TRAPPC2L-210ENST00000565309 RIMBP3BA6NNM3 1639 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms