RNA–Protein interactions for RNA: ENST00000565205.5

TRAPPC2L-209, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 1 (best)

Gene TRAPPC2L, Length 1,084 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-209ENST00000565205 NISCHQ9Y2I1 1504 aa31.6■■■□□ 2.65
TRAPPC2L-209ENST00000565205 ABCC9O60706 1549 aa28.68■■■□□ 2.18
TRAPPC2L-209ENST00000565205 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
TRAPPC2L-209ENST00000565205 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
TRAPPC2L-209ENST00000565205 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
TRAPPC2L-209ENST00000565205 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
TRAPPC2L-209ENST00000565205 NACADO15069 1562 aa26.53■■□□□ 1.84
TRAPPC2L-209ENST00000565205 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
TRAPPC2L-209ENST00000565205 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
TRAPPC2L-209ENST00000565205 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
TRAPPC2L-209ENST00000565205 ZCCHC6Q5VYS8 1495 aaKnown RBP26.31■■□□□ 1.8
TRAPPC2L-209ENST00000565205 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
TRAPPC2L-209ENST00000565205 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
TRAPPC2L-209ENST00000565205 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
TRAPPC2L-209ENST00000565205 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
TRAPPC2L-209ENST00000565205 DNAJC5Q9H3Z4 198 aa25.78■■□□□ 1.72
TRAPPC2L-209ENST00000565205 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
TRAPPC2L-209ENST00000565205 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.69
TRAPPC2L-209ENST00000565205 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
TRAPPC2L-209ENST00000565205 CUX2O14529 1486 aa24.88■■□□□ 1.57
TRAPPC2L-209ENST00000565205 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
TRAPPC2L-209ENST00000565205 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
TRAPPC2L-209ENST00000565205 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
TRAPPC2L-209ENST00000565205 NESP48681 1621 aa24.48■■□□□ 1.51
TRAPPC2L-209ENST00000565205 NCAPD3P42695 1498 aa24.46■■□□□ 1.51
TRAPPC2L-209ENST00000565205 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
TRAPPC2L-209ENST00000565205 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
TRAPPC2L-209ENST00000565205 TRIM41Q8WV44 630 aa24.39■■□□□ 1.49
TRAPPC2L-209ENST00000565205 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
TRAPPC2L-209ENST00000565205 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
TRAPPC2L-209ENST00000565205 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.48
TRAPPC2L-209ENST00000565205 THOC2Q8NI27 1593 aaKnown RBP24.32■■□□□ 1.48
TRAPPC2L-209ENST00000565205 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
TRAPPC2L-209ENST00000565205 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
TRAPPC2L-209ENST00000565205 WIZO95785 1651 aa24.08■■□□□ 1.45
TRAPPC2L-209ENST00000565205 LAMC3Q9Y6N6 1575 aa24.02■■□□□ 1.44
TRAPPC2L-209ENST00000565205 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC2L-209ENST00000565205 PDS5BQ9NTI5 1447 aa23.85■■□□□ 1.41
TRAPPC2L-209ENST00000565205 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
TRAPPC2L-209ENST00000565205 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
TRAPPC2L-209ENST00000565205 WDR62O43379 1518 aa23.75■■□□□ 1.39
TRAPPC2L-209ENST00000565205 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
TRAPPC2L-209ENST00000565205 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
TRAPPC2L-209ENST00000565205 CFTRP13569 1480 aa23.56■■□□□ 1.36
TRAPPC2L-209ENST00000565205 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
TRAPPC2L-209ENST00000565205 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
TRAPPC2L-209ENST00000565205 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
TRAPPC2L-209ENST00000565205 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
TRAPPC2L-209ENST00000565205 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
TRAPPC2L-209ENST00000565205 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
TRAPPC2L-209ENST00000565205 FANCD2Q9BXW9 1451 aa23.47■■□□□ 1.35
TRAPPC2L-209ENST00000565205 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
TRAPPC2L-209ENST00000565205 ARHGEF11O15085 1522 aa23.33■■□□□ 1.33
TRAPPC2L-209ENST00000565205 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
TRAPPC2L-209ENST00000565205 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC2L-209ENST00000565205 CYB5RLQ6IPT4 315 aa23.2■■□□□ 1.3
TRAPPC2L-209ENST00000565205 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.29
TRAPPC2L-209ENST00000565205 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
TRAPPC2L-209ENST00000565205 ARAP1Q96P48 1450 aa23.1■■□□□ 1.29
TRAPPC2L-209ENST00000565205 TOPBP1Q92547 1522 aa23.08■■□□□ 1.28
TRAPPC2L-209ENST00000565205 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
TRAPPC2L-209ENST00000565205 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
TRAPPC2L-209ENST00000565205 CHD1O14646 1710 aa23.04■■□□□ 1.28
TRAPPC2L-209ENST00000565205 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
TRAPPC2L-209ENST00000565205 AEBP2Q6ZN18 517 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC2L-209ENST00000565205 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.267e-7■■■□□ 15.5
TRAPPC2L-209ENST00000565205 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
TRAPPC2L-209ENST00000565205 CUX1P39880 1505 aa22.84■■□□□ 1.25
TRAPPC2L-209ENST00000565205 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
TRAPPC2L-209ENST00000565205 FBLN2P98095 1184 aa22.83■■□□□ 1.25
TRAPPC2L-209ENST00000565205 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
TRAPPC2L-209ENST00000565205 SOGA1O94964 1423 aa22.77■■□□□ 1.24
TRAPPC2L-209ENST00000565205 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
TRAPPC2L-209ENST00000565205 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
TRAPPC2L-209ENST00000565205 CLASP1Q7Z460 1538 aa22.71■■□□□ 1.23
TRAPPC2L-209ENST00000565205 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
TRAPPC2L-209ENST00000565205 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
TRAPPC2L-209ENST00000565205 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
TRAPPC2L-209ENST00000565205 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
TRAPPC2L-209ENST00000565205 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
TRAPPC2L-209ENST00000565205 SYNJ1O43426 1573 aa22.61■■□□□ 1.21
TRAPPC2L-209ENST00000565205 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
TRAPPC2L-209ENST00000565205 GRIN2BQ13224 1484 aa22.54■■□□□ 1.2
TRAPPC2L-209ENST00000565205 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
TRAPPC2L-209ENST00000565205 ABCA5Q8WWZ7 1642 aa22.52■■□□□ 1.2
TRAPPC2L-209ENST00000565205 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.2
TRAPPC2L-209ENST00000565205 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
TRAPPC2L-209ENST00000565205 CHMP7Q8WUX9 453 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC2L-209ENST00000565205 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
TRAPPC2L-209ENST00000565205 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
TRAPPC2L-209ENST00000565205 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
TRAPPC2L-209ENST00000565205 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
TRAPPC2L-209ENST00000565205 KIF13AQ9H1H9 1805 aa22.29■■□□□ 1.16
TRAPPC2L-209ENST00000565205 FHAD1B1AJZ9 1412 aa22.26■■□□□ 1.15
TRAPPC2L-209ENST00000565205 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
TRAPPC2L-209ENST00000565205 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
TRAPPC2L-209ENST00000565205 CEP170Q5SW79 1584 aa22.19■■□□□ 1.14
TRAPPC2L-209ENST00000565205 ILDR1Q86SU0 546 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC2L-209ENST00000565205 CUL7Q14999 1698 aa22.14■■□□□ 1.14
TRAPPC2L-209ENST00000565205 NUP160Q12769 1436 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms