Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AL355073.2-201ENST00000612106 557 ntBASIC19.82■□□□□ 0.76
HOXD11P31277 AC010809.3-201ENST00000621310 641 ntBASIC19.82■□□□□ 0.76
HOXD11P31277 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXD11P31277 AL031985.4-201ENST00000642138 673 ntBASIC19.82■□□□□ 0.76
HOXD11P31277 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD11P31277 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD11P31277 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXD11P31277 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD11P31277 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD11P31277 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HOXD11P31277 AL353803.4-201ENST00000565882 1934 ntBASIC19.81■□□□□ 0.76
HOXD11P31277 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
HOXD11P31277 NDUFA5P10-201ENST00000432147 357 ntBASIC19.81■□□□□ 0.76
HOXD11P31277 GTF3AP6-201ENST00000432585 986 ntBASIC19.81■□□□□ 0.76
HOXD11P31277 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD11P31277 NUS1P1-201ENST00000446295 882 ntBASIC19.81■□□□□ 0.76
HOXD11P31277 KRT18P38-201ENST00000449496 1282 ntBASIC19.81■□□□□ 0.76
HOXD11P31277 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD11P31277 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD11P31277 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXD11P31277 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD11P31277 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD11P31277 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXD11P31277 AC139099.1-204ENST00000575205 425 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HOXD11P31277 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HOXD11P31277 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HOXD11P31277 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXD11P31277 AC245008.1-201ENST00000608123 476 ntBASIC19.81■□□□□ 0.76
HOXD11P31277 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXD11P31277 AC019226.1-201ENST00000625666 515 ntBASIC19.81■□□□□ 0.76
HOXD11P31277 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXD11P31277 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD11P31277 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXD11P31277 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD11P31277 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HOXD11P31277 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD11P31277 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD11P31277 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD11P31277 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD11P31277 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC19.8■□□□□ 0.76
HOXD11P31277 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 LMNTD1-203ENST00000445693 1285 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 AL500527.1-201ENST00000448532 255 ntBASIC19.8■□□□□ 0.76
HOXD11P31277 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXD11P31277 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD11P31277 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXD11P31277 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXD11P31277 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXD11P31277 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC19.8■□□□□ 0.76
HOXD11P31277 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD11P31277 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD11P31277 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
HOXD11P31277 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD11P31277 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD11P31277 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD11P31277 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD11P31277 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXD11P31277 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD11P31277 HLA-A-201ENST00000376802 1334 ntBASIC19.79■□□□□ 0.76
HOXD11P31277 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXD11P31277 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD11P31277 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD11P31277 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD11P31277 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD11P31277 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD11P31277 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXD11P31277 EIF4A2P2-201ENST00000455776 1070 ntBASIC19.79■□□□□ 0.76
HOXD11P31277 AF213884.2-201ENST00000510417 903 ntBASIC19.79■□□□□ 0.76
HOXD11P31277 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXD11P31277 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD11P31277 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXD11P31277 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
HOXD11P31277 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD11P31277 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.79■□□□□ 0.76
HOXD11P31277 AC098483.2-201ENST00000603158 454 ntBASIC19.79■□□□□ 0.76
HOXD11P31277 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD11P31277 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms