RNA–Protein interactions for RNA: ENST00000602510.1

AP000654.1-201, humanhuman

TSL 5 BASIC

Gene AP000654.1, Length 1,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000654.1-201ENST00000602510 AEBP2Q6ZN18 517 aaPredicted RBP30.08■■■□□ 2.41
AP000654.1-201ENST00000602510 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
AP000654.1-201ENST00000602510 PHF23Q9BUL5 403 aaPredicted RBP25.58■■□□□ 1.69
AP000654.1-201ENST00000602510 SENP3Q9H4L4 574 aaPredicted RBP25.48■■□□□ 1.67
AP000654.1-201ENST00000602510 FOXD1Q16676 465 aa23.73■■□□□ 1.39
AP000654.1-201ENST00000602510 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
AP000654.1-201ENST00000602510 POTEDQ86YR6 584 aa23.24■■□□□ 1.31
AP000654.1-201ENST00000602510 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
AP000654.1-201ENST00000602510 ADRA2BP18089 450 aa22.59■■□□□ 1.21
AP000654.1-201ENST00000602510 PIAS4Q8N2W9 510 aaPredicted RBP22.28■■□□□ 1.16
AP000654.1-201ENST00000602510 MSH5O43196 834 aa22.24■■□□□ 1.15
AP000654.1-201ENST00000602510 PPP4R3CPQ6ZMV5 832 aa20.65■□□□□ 0.9
AP000654.1-201ENST00000602510 MAPK8IP2Q13387 824 aaPredicted RBP20.59■□□□□ 0.89
AP000654.1-201ENST00000602510 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
AP000654.1-201ENST00000602510 DMRT2Q9Y5R5 561 aa20.33■□□□□ 0.85
AP000654.1-201ENST00000602510 CNKSR2Q8WXI2 1034 aa20.12■□□□□ 0.81
AP000654.1-201ENST00000602510 NCBP3Q53F19 620 aaKnown RBP19.97■□□□□ 0.79
AP000654.1-201ENST00000602510 KCNA4P22459 653 aa19.9■□□□□ 0.78
AP000654.1-201ENST00000602510 HOXD11P31277 338 aaPredicted RBP19.81■□□□□ 0.76
AP000654.1-201ENST00000602510 RNF216Q9NWF9 866 aaPredicted RBP19.79■□□□□ 0.76
AP000654.1-201ENST00000602510 NPM3O75607 178 aaKnown RBP19.77■□□□□ 0.76
AP000654.1-201ENST00000602510 CACNB1Q02641 598 aaPredicted RBP19.61■□□□□ 0.73
AP000654.1-201ENST00000602510 DCAF8L1A6NGE4 600 aa19.41■□□□□ 0.7
AP000654.1-201ENST00000602510 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
AP000654.1-201ENST00000602510 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
AP000654.1-201ENST00000602510 RNF39Q9H2S5 420 aa18.86■□□□□ 0.61
AP000654.1-201ENST00000602510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.6
AP000654.1-201ENST00000602510 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
AP000654.1-201ENST00000602510 C1QBPQ07021 282 aaKnown RBP18.56■□□□□ 0.56
AP000654.1-201ENST00000602510 U3KPZ7 1027 aaPredicted RBP18.56■□□□□ 0.56
AP000654.1-201ENST00000602510 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
AP000654.1-201ENST00000602510 ZBTB22O15209 634 aa18.35■□□□□ 0.53
AP000654.1-201ENST00000602510 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
AP000654.1-201ENST00000602510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
AP000654.1-201ENST00000602510 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
AP000654.1-201ENST00000602510 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
AP000654.1-201ENST00000602510 SAMD1Q6SPF0 538 aaPredicted RBP18.08■□□□□ 0.48
AP000654.1-201ENST00000602510 POTEHQ6S545 545 aa18.04■□□□□ 0.48
AP000654.1-201ENST00000602510 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
AP000654.1-201ENST00000602510 CAPN15O75808 1086 aa18■□□□□ 0.47
AP000654.1-201ENST00000602510 APLP2Q06481 763 aa17.99■□□□□ 0.47
AP000654.1-201ENST00000602510 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
AP000654.1-201ENST00000602510 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
AP000654.1-201ENST00000602510 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
AP000654.1-201ENST00000602510 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
AP000654.1-201ENST00000602510 DSG3P32926 999 aa17.81■□□□□ 0.44
AP000654.1-201ENST00000602510 ATXN8OSP0DMR3 200 aa17.72■□□□□ 0.43
AP000654.1-201ENST00000602510 ABCB7O75027 752 aa17.68■□□□□ 0.42
AP000654.1-201ENST00000602510 POLA2Q14181 598 aa17.52■□□□□ 0.4
AP000654.1-201ENST00000602510 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
AP000654.1-201ENST00000602510 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
AP000654.1-201ENST00000602510 FBLN2P98095 1184 aa16.99■□□□□ 0.31
AP000654.1-201ENST00000602510 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
AP000654.1-201ENST00000602510 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
AP000654.1-201ENST00000602510 SPDYE2BA6NHP3 402 aa16.71■□□□□ 0.27
AP000654.1-201ENST00000602510 SPDYE6P0CI01 402 aa16.71■□□□□ 0.27
AP000654.1-201ENST00000602510 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
AP000654.1-201ENST00000602510 NISCHQ9Y2I1 1504 aa16.67■□□□□ 0.26
AP000654.1-201ENST00000602510 AKT1S1Q96B36 256 aa16.67■□□□□ 0.26
AP000654.1-201ENST00000602510 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
AP000654.1-201ENST00000602510 SSUH2Q9Y2M2 353 aa16.6■□□□□ 0.25
AP000654.1-201ENST00000602510 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
AP000654.1-201ENST00000602510 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
AP000654.1-201ENST00000602510 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
AP000654.1-201ENST00000602510 SPDYE4A6NLX3 237 aa16.47■□□□□ 0.23
AP000654.1-201ENST00000602510 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
AP000654.1-201ENST00000602510 PITPNM1O00562 1244 aa16.37■□□□□ 0.21
AP000654.1-201ENST00000602510 SPDYE1Q8NFV5 336 aaPredicted RBP16.27■□□□□ 0.2
AP000654.1-201ENST00000602510 FKBP8Q14318 412 aa16.24■□□□□ 0.19
AP000654.1-201ENST00000602510 PROM2Q8N271 834 aa16.21■□□□□ 0.19
AP000654.1-201ENST00000602510 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
AP000654.1-201ENST00000602510 FXR2P51116 673 aaKnown RBP eCLIP16.11■□□□□ 0.17
AP000654.1-201ENST00000602510 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
AP000654.1-201ENST00000602510 PRR29P0C7W0 189 aa16.02■□□□□ 0.16
AP000654.1-201ENST00000602510 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
AP000654.1-201ENST00000602510 HAX1O00165 279 aa15.93■□□□□ 0.14
AP000654.1-201ENST00000602510 PRKAR2AP13861 404 aaKnown RBP15.93■□□□□ 0.14
AP000654.1-201ENST00000602510 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
AP000654.1-201ENST00000602510 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
AP000654.1-201ENST00000602510 FARP1Q9Y4F1 1045 aaPredicted RBP15.69■□□□□ 0.1
AP000654.1-201ENST00000602510 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
AP000654.1-201ENST00000602510 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
AP000654.1-201ENST00000602510 ABCC9O60706 1549 aa15.64■□□□□ 0.09
AP000654.1-201ENST00000602510 MIER1Q8N108 512 aa15.61■□□□□ 0.09
AP000654.1-201ENST00000602510 EVX2Q03828 476 aa15.59■□□□□ 0.09
AP000654.1-201ENST00000602510 C19orf67A6NJJ6 358 aa15.57■□□□□ 0.08
AP000654.1-201ENST00000602510 PLCD3Q8N3E9 789 aa15.55■□□□□ 0.08
AP000654.1-201ENST00000602510 VASPP50552 380 aaPredicted RBP15.53■□□□□ 0.08
AP000654.1-201ENST00000602510 PLEKHG5O94827 1062 aa15.49■□□□□ 0.07
AP000654.1-201ENST00000602510 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
AP000654.1-201ENST00000602510 CD44P16070 742 aaKnown RBP15.45■□□□□ 0.06
AP000654.1-201ENST00000602510 LHX8Q68G74 356 aa15.43■□□□□ 0.06
AP000654.1-201ENST00000602510 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
AP000654.1-201ENST00000602510 IFNLR1Q8IU57 520 aaPredicted RBP15.33■□□□□ 0.04
AP000654.1-201ENST00000602510 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
AP000654.1-201ENST00000602510 NUBP1P53384 320 aa15.31■□□□□ 0.04
AP000654.1-201ENST00000602510 RASEFQ8IZ41 740 aa15.3■□□□□ 0.04
AP000654.1-201ENST00000602510 KLHL34Q8N239 644 aa15.27■□□□□ 0.04
AP000654.1-201ENST00000602510 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
AP000654.1-201ENST00000602510 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms