RNA–Protein interactions for RNA: ENST00000575205.1

AC139099.1-204, humanhuman

TSL 1 (best) BASIC

Gene AC139099.1, Length 425 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC139099.1-204ENST00000575205 AEBP2Q6ZN18 517 aaPredicted RBP30.47■■■□□ 2.47
AC139099.1-204ENST00000575205 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
AC139099.1-204ENST00000575205 SENP3Q9H4L4 574 aaPredicted RBP26.04■■□□□ 1.76
AC139099.1-204ENST00000575205 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
AC139099.1-204ENST00000575205 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
AC139099.1-204ENST00000575205 FOXD1Q16676 465 aa24.27■■□□□ 1.48
AC139099.1-204ENST00000575205 PLPPR3Q6T4P5 718 aa22.94■■□□□ 1.26
AC139099.1-204ENST00000575205 MSH5O43196 834 aa22.8■■□□□ 1.24
AC139099.1-204ENST00000575205 PIAS4Q8N2W9 510 aaPredicted RBP22.65■■□□□ 1.22
AC139099.1-204ENST00000575205 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
AC139099.1-204ENST00000575205 POTEDQ86YR6 584 aa22.5■■□□□ 1.19
AC139099.1-204ENST00000575205 ADRA2BP18089 450 aa22.47■■□□□ 1.19
AC139099.1-204ENST00000575205 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
AC139099.1-204ENST00000575205 ABCC9O60706 1549 aa22.26■■□□□ 1.15
AC139099.1-204ENST00000575205 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
AC139099.1-204ENST00000575205 RB1CC1Q8TDY2 1594 aa21.21■□□□□ 0.99
AC139099.1-204ENST00000575205 NACADO15069 1562 aa21.1■□□□□ 0.97
AC139099.1-204ENST00000575205 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.93
AC139099.1-204ENST00000575205 ZCCHC6Q5VYS8 1495 aaKnown RBP20.82■□□□□ 0.92
AC139099.1-204ENST00000575205 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
AC139099.1-204ENST00000575205 UNC13AQ9UPW8 1703 aa20.71■□□□□ 0.91
AC139099.1-204ENST00000575205 MAPK8IP2Q13387 824 aaPredicted RBP20.68■□□□□ 0.9
AC139099.1-204ENST00000575205 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
AC139099.1-204ENST00000575205 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
AC139099.1-204ENST00000575205 DMRT2Q9Y5R5 561 aa20.62■□□□□ 0.89
AC139099.1-204ENST00000575205 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
AC139099.1-204ENST00000575205 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
AC139099.1-204ENST00000575205 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
AC139099.1-204ENST00000575205 SHROOM4Q9ULL8 1493 aa20.25■□□□□ 0.83
AC139099.1-204ENST00000575205 PPP4R3CPQ6ZMV5 832 aa20.07■□□□□ 0.8
AC139099.1-204ENST00000575205 CC2D2AQ9P2K1 1620 aa20.06■□□□□ 0.8
AC139099.1-204ENST00000575205 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
AC139099.1-204ENST00000575205 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
AC139099.1-204ENST00000575205 HOXD11P31277 338 aaPredicted RBP19.81■□□□□ 0.76
AC139099.1-204ENST00000575205 DCAF8L1A6NGE4 600 aa19.75■□□□□ 0.75
AC139099.1-204ENST00000575205 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
AC139099.1-204ENST00000575205 CACNB1Q02641 598 aaPredicted RBP19.63■□□□□ 0.73
AC139099.1-204ENST00000575205 RNF216Q9NWF9 866 aaPredicted RBP19.61■□□□□ 0.73
AC139099.1-204ENST00000575205 SMARCA4P51532 1647 aa19.52■□□□□ 0.72
AC139099.1-204ENST00000575205 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
AC139099.1-204ENST00000575205 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
AC139099.1-204ENST00000575205 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
AC139099.1-204ENST00000575205 RNF39Q9H2S5 420 aa19.43■□□□□ 0.7
AC139099.1-204ENST00000575205 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
AC139099.1-204ENST00000575205 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
AC139099.1-204ENST00000575205 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
AC139099.1-204ENST00000575205 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
AC139099.1-204ENST00000575205 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
AC139099.1-204ENST00000575205 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
AC139099.1-204ENST00000575205 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
AC139099.1-204ENST00000575205 NESP48681 1621 aa19.18■□□□□ 0.66
AC139099.1-204ENST00000575205 WIZO95785 1651 aa19.15■□□□□ 0.66
AC139099.1-204ENST00000575205 C1QBPQ07021 282 aaKnown RBP19.14■□□□□ 0.65
AC139099.1-204ENST00000575205 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
AC139099.1-204ENST00000575205 LAMC3Q9Y6N6 1575 aa19.01■□□□□ 0.63
AC139099.1-204ENST00000575205 CUX2O14529 1486 aa18.99■□□□□ 0.63
AC139099.1-204ENST00000575205 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
AC139099.1-204ENST00000575205 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
AC139099.1-204ENST00000575205 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
AC139099.1-204ENST00000575205 KIF21AQ7Z4S6 1674 aa18.9■□□□□ 0.62
AC139099.1-204ENST00000575205 TOP2AP11388 1531 aaKnown RBP18.89■□□□□ 0.61
AC139099.1-204ENST00000575205 THOC2Q8NI27 1593 aaKnown RBP18.85■□□□□ 0.61
AC139099.1-204ENST00000575205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.61
AC139099.1-204ENST00000575205 DNAJC5Q9H3Z4 198 aa18.81■□□□□ 0.6
AC139099.1-204ENST00000575205 CFTRP13569 1480 aa18.75■□□□□ 0.59
AC139099.1-204ENST00000575205 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
AC139099.1-204ENST00000575205 FANCD2Q9BXW9 1451 aa18.74■□□□□ 0.59
AC139099.1-204ENST00000575205 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
AC139099.1-204ENST00000575205 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
AC139099.1-204ENST00000575205 WDR62O43379 1518 aa18.65■□□□□ 0.58
AC139099.1-204ENST00000575205 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
AC139099.1-204ENST00000575205 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
AC139099.1-204ENST00000575205 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
AC139099.1-204ENST00000575205 KCNA4P22459 653 aa18.46■□□□□ 0.55
AC139099.1-204ENST00000575205 U3KPZ7 1027 aaPredicted RBP18.45■□□□□ 0.54
AC139099.1-204ENST00000575205 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
AC139099.1-204ENST00000575205 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
AC139099.1-204ENST00000575205 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
AC139099.1-204ENST00000575205 IFT140Q96RY7 1462 aa18.33■□□□□ 0.53
AC139099.1-204ENST00000575205 ZNF608Q9ULD9 1512 aaPredicted RBP18.31■□□□□ 0.52
AC139099.1-204ENST00000575205 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
AC139099.1-204ENST00000575205 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
AC139099.1-204ENST00000575205 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
AC139099.1-204ENST00000575205 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.5
AC139099.1-204ENST00000575205 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
AC139099.1-204ENST00000575205 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
AC139099.1-204ENST00000575205 CAPN15O75808 1086 aa18.19■□□□□ 0.5
AC139099.1-204ENST00000575205 SOGA1O94964 1423 aa18.19■□□□□ 0.5
AC139099.1-204ENST00000575205 TARBP1Q13395 1621 aaKnown RBP18.19■□□□□ 0.5
AC139099.1-204ENST00000575205 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
AC139099.1-204ENST00000575205 CUX1P39880 1505 aa18.18■□□□□ 0.5
AC139099.1-204ENST00000575205 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
AC139099.1-204ENST00000575205 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
AC139099.1-204ENST00000575205 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
AC139099.1-204ENST00000575205 DSG3P32926 999 aa18.14■□□□□ 0.49
AC139099.1-204ENST00000575205 FBLN2P98095 1184 aa18.14■□□□□ 0.49
AC139099.1-204ENST00000575205 CHD1O14646 1710 aa18.02■□□□□ 0.48
AC139099.1-204ENST00000575205 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
AC139099.1-204ENST00000575205 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
AC139099.1-204ENST00000575205 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms