RNA–Protein interactions for RNA: ENST00000445693.5

LMNTD1-203, Transcript of lamin tail domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LMNTD1, Length 1,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-203ENST00000445693 AEBP2Q6ZN18 517 aaPredicted RBP30.05■■■□□ 2.4
LMNTD1-203ENST00000445693 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
LMNTD1-203ENST00000445693 PHF23Q9BUL5 403 aaPredicted RBP25.61■■□□□ 1.69
LMNTD1-203ENST00000445693 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
LMNTD1-203ENST00000445693 FOXD1Q16676 465 aa23.69■■□□□ 1.38
LMNTD1-203ENST00000445693 PLPPR3Q6T4P5 718 aa23.47■■□□□ 1.35
LMNTD1-203ENST00000445693 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
LMNTD1-203ENST00000445693 ADRA2BP18089 450 aa22.59■■□□□ 1.21
LMNTD1-203ENST00000445693 PIAS4Q8N2W9 510 aaPredicted RBP22.25■■□□□ 1.15
LMNTD1-203ENST00000445693 MSH5O43196 834 aa21.85■■□□□ 1.09
LMNTD1-203ENST00000445693 PPP4R3CPQ6ZMV5 832 aa20.68■□□□□ 0.9
LMNTD1-203ENST00000445693 MAPK8IP2Q13387 824 aaPredicted RBP20.58■□□□□ 0.89
LMNTD1-203ENST00000445693 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
LMNTD1-203ENST00000445693 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
LMNTD1-203ENST00000445693 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
LMNTD1-203ENST00000445693 CNKSR2Q8WXI2 1034 aa20.12■□□□□ 0.81
LMNTD1-203ENST00000445693 KCNA4P22459 653 aa19.99■□□□□ 0.79
LMNTD1-203ENST00000445693 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
LMNTD1-203ENST00000445693 NPM3O75607 178 aaKnown RBP19.82■□□□□ 0.76
LMNTD1-203ENST00000445693 HOXD11P31277 338 aaPredicted RBP19.8■□□□□ 0.76
LMNTD1-203ENST00000445693 RNF216Q9NWF9 866 aaPredicted RBP19.79■□□□□ 0.76
LMNTD1-203ENST00000445693 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
LMNTD1-203ENST00000445693 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
LMNTD1-203ENST00000445693 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
LMNTD1-203ENST00000445693 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
LMNTD1-203ENST00000445693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.6
LMNTD1-203ENST00000445693 SLC4A2P04920 1241 aa18.79■□□□□ 0.6
LMNTD1-203ENST00000445693 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
LMNTD1-203ENST00000445693 U3KPZ7 1027 aaPredicted RBP18.56■□□□□ 0.56
LMNTD1-203ENST00000445693 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
LMNTD1-203ENST00000445693 ZBTB22O15209 634 aa18.45■□□□□ 0.54
LMNTD1-203ENST00000445693 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
LMNTD1-203ENST00000445693 CACNB1Q02641 598 aaPredicted RBP18.37■□□□□ 0.53
LMNTD1-203ENST00000445693 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
LMNTD1-203ENST00000445693 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
LMNTD1-203ENST00000445693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
LMNTD1-203ENST00000445693 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
LMNTD1-203ENST00000445693 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
LMNTD1-203ENST00000445693 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
LMNTD1-203ENST00000445693 SAMD1Q6SPF0 538 aaPredicted RBP18.08■□□□□ 0.48
LMNTD1-203ENST00000445693 CAPN15O75808 1086 aa17.98■□□□□ 0.47
LMNTD1-203ENST00000445693 APLP2Q06481 763 aa17.96■□□□□ 0.47
LMNTD1-203ENST00000445693 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
LMNTD1-203ENST00000445693 TRHP20396 242 aaPredicted RBP17.85■□□□□ 0.45
LMNTD1-203ENST00000445693 ZNF219Q9P2Y4 722 aaPredicted RBP17.81■□□□□ 0.44
LMNTD1-203ENST00000445693 DSG3P32926 999 aa17.78■□□□□ 0.44
LMNTD1-203ENST00000445693 ATXN8OSP0DMR3 200 aa17.76■□□□□ 0.43
LMNTD1-203ENST00000445693 ABCB7O75027 752 aa17.66■□□□□ 0.42
LMNTD1-203ENST00000445693 POLA2Q14181 598 aa17.52■□□□□ 0.4
LMNTD1-203ENST00000445693 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
LMNTD1-203ENST00000445693 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
LMNTD1-203ENST00000445693 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
LMNTD1-203ENST00000445693 FBLN2P98095 1184 aa17■□□□□ 0.31
LMNTD1-203ENST00000445693 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
LMNTD1-203ENST00000445693 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
LMNTD1-203ENST00000445693 SPDYE2BA6NHP3 402 aa16.71■□□□□ 0.27
LMNTD1-203ENST00000445693 SPDYE6P0CI01 402 aa16.71■□□□□ 0.27
LMNTD1-203ENST00000445693 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
LMNTD1-203ENST00000445693 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
LMNTD1-203ENST00000445693 SSUH2Q9Y2M2 353 aa16.62■□□□□ 0.25
LMNTD1-203ENST00000445693 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
LMNTD1-203ENST00000445693 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
LMNTD1-203ENST00000445693 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
LMNTD1-203ENST00000445693 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
LMNTD1-203ENST00000445693 PITPNM1O00562 1244 aa16.35■□□□□ 0.21
LMNTD1-203ENST00000445693 FKBP8Q14318 412 aa16.35■□□□□ 0.21
LMNTD1-203ENST00000445693 ABCC9O60706 1549 aa16.3■□□□□ 0.2
LMNTD1-203ENST00000445693 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
LMNTD1-203ENST00000445693 PROM2Q8N271 834 aa16.28■□□□□ 0.2
LMNTD1-203ENST00000445693 ZCCHC6Q5VYS8 1495 aaKnown RBP16.28■□□□□ 0.2
LMNTD1-203ENST00000445693 SPDYE1Q8NFV5 336 aaPredicted RBP16.26■□□□□ 0.19
LMNTD1-203ENST00000445693 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
LMNTD1-203ENST00000445693 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
LMNTD1-203ENST00000445693 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
LMNTD1-203ENST00000445693 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
LMNTD1-203ENST00000445693 PIP4P2Q8N4L2 257 aa16.07■□□□□ 0.16
LMNTD1-203ENST00000445693 POTEHQ6S545 545 aa16.04■□□□□ 0.16
LMNTD1-203ENST00000445693 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
LMNTD1-203ENST00000445693 PRR29P0C7W0 189 aa16.01■□□□□ 0.15
LMNTD1-203ENST00000445693 NACADO15069 1562 aa16■□□□□ 0.15
LMNTD1-203ENST00000445693 MYO15BQ96JP2 1530 aa15.97■□□□□ 0.15
LMNTD1-203ENST00000445693 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.15
LMNTD1-203ENST00000445693 PRKAR2AP13861 404 aaKnown RBP15.91■□□□□ 0.14
LMNTD1-203ENST00000445693 CHADLQ6NUI6 762 aa15.89■□□□□ 0.13
LMNTD1-203ENST00000445693 CREBZFQ9NS37 354 aa15.84■□□□□ 0.13
LMNTD1-203ENST00000445693 FBXO3Q9UK99 471 aa15.75■□□□□ 0.11
LMNTD1-203ENST00000445693 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
LMNTD1-203ENST00000445693 FARP1Q9Y4F1 1045 aaPredicted RBP15.69■□□□□ 0.1
LMNTD1-203ENST00000445693 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
LMNTD1-203ENST00000445693 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
LMNTD1-203ENST00000445693 MIER1Q8N108 512 aa15.65■□□□□ 0.1
LMNTD1-203ENST00000445693 UNC13AQ9UPW8 1703 aa15.61■□□□□ 0.09
LMNTD1-203ENST00000445693 VASPP50552 380 aaPredicted RBP15.61■□□□□ 0.09
LMNTD1-203ENST00000445693 PLCD3Q8N3E9 789 aa15.6■□□□□ 0.09
LMNTD1-203ENST00000445693 HAX1O00165 279 aa15.55■□□□□ 0.08
LMNTD1-203ENST00000445693 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
LMNTD1-203ENST00000445693 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
LMNTD1-203ENST00000445693 EVX2Q03828 476 aa15.51■□□□□ 0.07
LMNTD1-203ENST00000445693 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
LMNTD1-203ENST00000445693 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms