RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 AEBP2Q6ZN18 517 aaPredicted RBP30.22■■■□□ 2.43
SFR1-201ENST00000369727 CHIC1Q5VXU3 224 aa28.98■■■□□ 2.23
SFR1-201ENST00000369727 SENP3Q9H4L4 574 aaPredicted RBP25.7■■□□□ 1.7
SFR1-201ENST00000369727 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
SFR1-201ENST00000369727 FOXD1Q16676 465 aa23.93■■□□□ 1.42
SFR1-201ENST00000369727 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
SFR1-201ENST00000369727 PPP6R1Q9UPN7 881 aa22.64■■□□□ 1.21
SFR1-201ENST00000369727 ADRA2BP18089 450 aa22.59■■□□□ 1.21
SFR1-201ENST00000369727 PIAS4Q8N2W9 510 aaPredicted RBP22.45■■□□□ 1.18
SFR1-201ENST00000369727 MSH5O43196 834 aa22.24■■□□□ 1.15
SFR1-201ENST00000369727 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
SFR1-201ENST00000369727 MAPK8IP2Q13387 824 aaPredicted RBP20.66■□□□□ 0.9
SFR1-201ENST00000369727 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
SFR1-201ENST00000369727 PPP4R3CPQ6ZMV5 832 aa20.48■□□□□ 0.87
SFR1-201ENST00000369727 DMRT2Q9Y5R5 561 aa20.43■□□□□ 0.86
SFR1-201ENST00000369727 CNKSR2Q8WXI2 1034 aa20.01■□□□□ 0.79
SFR1-201ENST00000369727 HOXD11P31277 338 aaPredicted RBP19.8■□□□□ 0.76
SFR1-201ENST00000369727 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.76
SFR1-201ENST00000369727 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
SFR1-201ENST00000369727 DCAF8L1A6NGE4 600 aa19.62■□□□□ 0.73
SFR1-201ENST00000369727 NPM3O75607 178 aaKnown RBP19.51■□□□□ 0.71
SFR1-201ENST00000369727 KCNA4P22459 653 aa19.43■□□□□ 0.7
SFR1-201ENST00000369727 RNF39Q9H2S5 420 aa19.02■□□□□ 0.64
SFR1-201ENST00000369727 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
SFR1-201ENST00000369727 CACNB1Q02641 598 aaPredicted RBP18.92■□□□□ 0.62
SFR1-201ENST00000369727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.61
SFR1-201ENST00000369727 C1QBPQ07021 282 aaKnown RBP18.74■□□□□ 0.59
SFR1-201ENST00000369727 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
SFR1-201ENST00000369727 U3KPZ7 1027 aaPredicted RBP18.53■□□□□ 0.56
SFR1-201ENST00000369727 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
SFR1-201ENST00000369727 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
SFR1-201ENST00000369727 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
SFR1-201ENST00000369727 CAPN15O75808 1086 aa18.13■□□□□ 0.49
SFR1-201ENST00000369727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
SFR1-201ENST00000369727 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
SFR1-201ENST00000369727 MYCNP04198 464 aaPredicted RBP18.02■□□□□ 0.48
SFR1-201ENST00000369727 APLP2Q06481 763 aa18.01■□□□□ 0.47
SFR1-201ENST00000369727 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
SFR1-201ENST00000369727 SAMD1Q6SPF0 538 aaPredicted RBP18■□□□□ 0.47
SFR1-201ENST00000369727 DSG3P32926 999 aa17.93■□□□□ 0.46
SFR1-201ENST00000369727 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
SFR1-201ENST00000369727 ZBTB22O15209 634 aa17.87■□□□□ 0.45
SFR1-201ENST00000369727 ZNF219Q9P2Y4 722 aaPredicted RBP17.86■□□□□ 0.45
SFR1-201ENST00000369727 ABCB7O75027 752 aa17.75■□□□□ 0.43
SFR1-201ENST00000369727 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
SFR1-201ENST00000369727 POLA2Q14181 598 aa17.5■□□□□ 0.39
SFR1-201ENST00000369727 ATXN8OSP0DMR3 200 aa17.4■□□□□ 0.38
SFR1-201ENST00000369727 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
SFR1-201ENST00000369727 EHMT2Q96KQ7 1210 aa17.3■□□□□ 0.36
SFR1-201ENST00000369727 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
SFR1-201ENST00000369727 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
SFR1-201ENST00000369727 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
SFR1-201ENST00000369727 FBLN2P98095 1184 aa16.87■□□□□ 0.29
SFR1-201ENST00000369727 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
SFR1-201ENST00000369727 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
SFR1-201ENST00000369727 POTEHQ6S545 545 aa16.67■□□□□ 0.26
SFR1-201ENST00000369727 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.25
SFR1-201ENST00000369727 SPDYE6P0CI01 402 aa16.64■□□□□ 0.25
SFR1-201ENST00000369727 SPDYE2Q495Y8 402 aa16.64■□□□□ 0.25
SFR1-201ENST00000369727 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
SFR1-201ENST00000369727 CHRDL2Q6WN34 429 aa16.6■□□□□ 0.25
SFR1-201ENST00000369727 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.23
SFR1-201ENST00000369727 SSUH2Q9Y2M2 353 aa16.45■□□□□ 0.22
SFR1-201ENST00000369727 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
SFR1-201ENST00000369727 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
SFR1-201ENST00000369727 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
SFR1-201ENST00000369727 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
SFR1-201ENST00000369727 PIP4P2Q8N4L2 257 aa16.28■□□□□ 0.2
SFR1-201ENST00000369727 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
SFR1-201ENST00000369727 FXR2P51116 673 aaKnown RBP eCLIP16.22■□□□□ 0.19
SFR1-201ENST00000369727 SPDYE4A6NLX3 237 aa16.18■□□□□ 0.18
SFR1-201ENST00000369727 ABCC9O60706 1549 aa16.12■□□□□ 0.17
SFR1-201ENST00000369727 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
SFR1-201ENST00000369727 PRKAR2AP13861 404 aaKnown RBP16.03■□□□□ 0.16
SFR1-201ENST00000369727 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
SFR1-201ENST00000369727 HAX1O00165 279 aa15.91■□□□□ 0.14
SFR1-201ENST00000369727 STAG3Q9UJ98 1225 aa15.88■□□□□ 0.13
SFR1-201ENST00000369727 PROM2Q8N271 834 aa15.8■□□□□ 0.12
SFR1-201ENST00000369727 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
SFR1-201ENST00000369727 EVX2Q03828 476 aa15.75■□□□□ 0.11
SFR1-201ENST00000369727 FKBP8Q14318 412 aa15.71■□□□□ 0.11
SFR1-201ENST00000369727 CREBZFQ9NS37 354 aa15.71■□□□□ 0.11
SFR1-201ENST00000369727 FARP1Q9Y4F1 1045 aaPredicted RBP15.7■□□□□ 0.1
SFR1-201ENST00000369727 C19orf67A6NJJ6 358 aa15.69■□□□□ 0.1
SFR1-201ENST00000369727 CD44P16070 742 aaKnown RBP15.53■□□□□ 0.08
SFR1-201ENST00000369727 RB1CC1Q8TDY2 1594 aa15.48■□□□□ 0.07
SFR1-201ENST00000369727 MNX1P50219 401 aaPredicted RBP15.47■□□□□ 0.07
SFR1-201ENST00000369727 NACADO15069 1562 aa15.44■□□□□ 0.06
SFR1-201ENST00000369727 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
SFR1-201ENST00000369727 MIER1Q8N108 512 aa15.4■□□□□ 0.06
SFR1-201ENST00000369727 GABBR2O75899 941 aa15.39■□□□□ 0.05
SFR1-201ENST00000369727 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
SFR1-201ENST00000369727 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
SFR1-201ENST00000369727 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
SFR1-201ENST00000369727 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
SFR1-201ENST00000369727 MYO15BQ96JP2 1530 aa15.31■□□□□ 0.04
SFR1-201ENST00000369727 PAK3O75914 559 aaPredicted RBP15.3■□□□□ 0.04
SFR1-201ENST00000369727 ZNF579Q8NAF0 562 aaKnown RBP15.3■□□□□ 0.04
SFR1-201ENST00000369727 FBXO3Q9UK99 471 aa15.26■□□□□ 0.03
SFR1-201ENST00000369727 ZCCHC6Q5VYS8 1495 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms