RNA–Protein interactions for RNA: ENST00000586373.1

LINC01028-201, Transcript of long intergenic non-protein coding RNA 1028, humanhuman

TSL 1 (best) BASIC

Gene LINC01028, Length 1,045 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01028-201ENST00000586373 AEBP2Q6ZN18 517 aaPredicted RBP30.58■■■□□ 2.49
LINC01028-201ENST00000586373 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
LINC01028-201ENST00000586373 SENP3Q9H4L4 574 aaPredicted RBP25.9■■□□□ 1.74
LINC01028-201ENST00000586373 PHF23Q9BUL5 403 aaPredicted RBP25.67■■□□□ 1.7
LINC01028-201ENST00000586373 FOXD1Q16676 465 aa24.29■■□□□ 1.48
LINC01028-201ENST00000586373 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
LINC01028-201ENST00000586373 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
LINC01028-201ENST00000586373 ADRA2BP18089 450 aa22.62■■□□□ 1.21
LINC01028-201ENST00000586373 MSH5O43196 834 aa22.6■■□□□ 1.21
LINC01028-201ENST00000586373 PIAS4Q8N2W9 510 aaPredicted RBP22.6■■□□□ 1.21
LINC01028-201ENST00000586373 POTEDQ86YR6 584 aa22.35■■□□□ 1.17
LINC01028-201ENST00000586373 MAPK8IP2Q13387 824 aaPredicted RBP20.85■□□□□ 0.93
LINC01028-201ENST00000586373 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
LINC01028-201ENST00000586373 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
LINC01028-201ENST00000586373 PPP4R3CPQ6ZMV5 832 aa20.17■□□□□ 0.82
LINC01028-201ENST00000586373 HOXD11P31277 338 aaPredicted RBP19.79■□□□□ 0.76
LINC01028-201ENST00000586373 DCAF8L1A6NGE4 600 aa19.75■□□□□ 0.75
LINC01028-201ENST00000586373 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
LINC01028-201ENST00000586373 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
LINC01028-201ENST00000586373 CACNB1Q02641 598 aaPredicted RBP19.53■□□□□ 0.72
LINC01028-201ENST00000586373 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
LINC01028-201ENST00000586373 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
LINC01028-201ENST00000586373 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
LINC01028-201ENST00000586373 C1QBPQ07021 282 aaKnown RBP19.01■□□□□ 0.63
LINC01028-201ENST00000586373 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
LINC01028-201ENST00000586373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
LINC01028-201ENST00000586373 KCNA4P22459 653 aa18.71■□□□□ 0.59
LINC01028-201ENST00000586373 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
LINC01028-201ENST00000586373 SLC4A2P04920 1241 aa18.32■□□□□ 0.52
LINC01028-201ENST00000586373 SPINK5Q9NQ38 1064 aaPredicted RBP18.3■□□□□ 0.52
LINC01028-201ENST00000586373 CAPN15O75808 1086 aa18.18■□□□□ 0.5
LINC01028-201ENST00000586373 DSG3P32926 999 aa18.13■□□□□ 0.49
LINC01028-201ENST00000586373 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
LINC01028-201ENST00000586373 ABCB7O75027 752 aa17.83■□□□□ 0.44
LINC01028-201ENST00000586373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
LINC01028-201ENST00000586373 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
LINC01028-201ENST00000586373 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
LINC01028-201ENST00000586373 APLP2Q06481 763 aa17.73■□□□□ 0.43
LINC01028-201ENST00000586373 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
LINC01028-201ENST00000586373 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
LINC01028-201ENST00000586373 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
LINC01028-201ENST00000586373 POTEHQ6S545 545 aa17.46■□□□□ 0.39
LINC01028-201ENST00000586373 POLA2Q14181 598 aa17.4■□□□□ 0.38
LINC01028-201ENST00000586373 ATF5Q9Y2D1 282 aaPredicted RBP17.38■□□□□ 0.37
LINC01028-201ENST00000586373 ABCC9O60706 1549 aa17.37■□□□□ 0.37
LINC01028-201ENST00000586373 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
LINC01028-201ENST00000586373 ZBTB22O15209 634 aa17.25■□□□□ 0.35
LINC01028-201ENST00000586373 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
LINC01028-201ENST00000586373 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
LINC01028-201ENST00000586373 DNAJC5Q9H3Z4 198 aa17.04■□□□□ 0.32
LINC01028-201ENST00000586373 CHRDL2Q6WN34 429 aa16.91■□□□□ 0.3
LINC01028-201ENST00000586373 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
LINC01028-201ENST00000586373 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
LINC01028-201ENST00000586373 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
LINC01028-201ENST00000586373 ATXN8OSP0DMR3 200 aa16.79■□□□□ 0.28
LINC01028-201ENST00000586373 REM2Q8IYK8 340 aaPredicted RBP16.72■□□□□ 0.27
LINC01028-201ENST00000586373 PITPNM1O00562 1244 aa16.54■□□□□ 0.24
LINC01028-201ENST00000586373 MKRN4PQ13434 485 aaPredicted RBP16.53■□□□□ 0.24
LINC01028-201ENST00000586373 PIP4P2Q8N4L2 257 aa16.53■□□□□ 0.24
LINC01028-201ENST00000586373 FBLN2P98095 1184 aa16.48■□□□□ 0.23
LINC01028-201ENST00000586373 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
LINC01028-201ENST00000586373 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
LINC01028-201ENST00000586373 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
LINC01028-201ENST00000586373 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.22
LINC01028-201ENST00000586373 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
LINC01028-201ENST00000586373 SP7Q8TDD2 431 aaPredicted RBP16.3■□□□□ 0.2
LINC01028-201ENST00000586373 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
LINC01028-201ENST00000586373 SSUH2Q9Y2M2 353 aa16.25■□□□□ 0.19
LINC01028-201ENST00000586373 HAX1O00165 279 aa16.24■□□□□ 0.19
LINC01028-201ENST00000586373 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
LINC01028-201ENST00000586373 EVX2Q03828 476 aa16.18■□□□□ 0.18
LINC01028-201ENST00000586373 SPDYE1Q8NFV5 336 aaPredicted RBP16.15■□□□□ 0.18
LINC01028-201ENST00000586373 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
LINC01028-201ENST00000586373 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
LINC01028-201ENST00000586373 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
LINC01028-201ENST00000586373 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
LINC01028-201ENST00000586373 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
LINC01028-201ENST00000586373 PRR29P0C7W0 189 aa15.89■□□□□ 0.13
LINC01028-201ENST00000586373 C19orf67A6NJJ6 358 aa15.88■□□□□ 0.13
LINC01028-201ENST00000586373 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
LINC01028-201ENST00000586373 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.13
LINC01028-201ENST00000586373 CECR2Q9BXF3 1484 aa15.75■□□□□ 0.11
LINC01028-201ENST00000586373 GABBR2O75899 941 aa15.7■□□□□ 0.1
LINC01028-201ENST00000586373 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
LINC01028-201ENST00000586373 SPDYE4A6NLX3 237 aa15.61■□□□□ 0.09
LINC01028-201ENST00000586373 CC2D2AQ9P2K1 1620 aa15.59■□□□□ 0.09
LINC01028-201ENST00000586373 CD44P16070 742 aaKnown RBP15.56■□□□□ 0.08
LINC01028-201ENST00000586373 CREBZFQ9NS37 354 aa15.55■□□□□ 0.08
LINC01028-201ENST00000586373 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
LINC01028-201ENST00000586373 STAG3Q9UJ98 1225 aa15.47■□□□□ 0.07
LINC01028-201ENST00000586373 POTEIP0CG38 1075 aa15.45■□□□□ 0.06
LINC01028-201ENST00000586373 CUX2O14529 1486 aa15.45■□□□□ 0.06
LINC01028-201ENST00000586373 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
LINC01028-201ENST00000586373 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
LINC01028-201ENST00000586373 NACADO15069 1562 aa15.35■□□□□ 0.05
LINC01028-201ENST00000586373 LHX8Q68G74 356 aa15.32■□□□□ 0.04
LINC01028-201ENST00000586373 ZNF579Q8NAF0 562 aaKnown RBP15.3■□□□□ 0.04
LINC01028-201ENST00000586373 MNX1P50219 401 aaPredicted RBP15.29■□□□□ 0.04
LINC01028-201ENST00000586373 PROM2Q8N271 834 aa15.23■□□□□ 0.03
LINC01028-201ENST00000586373 GALR2O43603 387 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms