Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 AC083880.1-201ENST00000608266 535 ntBASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 GNAS-203ENST00000306120 1878 ntBASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01561Q8N1V8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 Z85996.1-201ENST00000494644 937 ntBASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01561Q8N1V8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms