Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBWD3Q5JTY5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 MMP23A-201ENST00000234610 1017 ntBASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 C2orf69P3-201ENST00000565542 1120 ntBASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBWD3Q5JTY5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 CCR12P-201ENST00000446203 998 ntBASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 MIR3180-5-201ENST00000583743 153 ntBASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 AC116562.4-202ENST00000641738 218 ntBASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBWD3Q5JTY5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 KRT18P41-201ENST00000518924 1277 ntBASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 EGLN1P1-201ENST00000531623 762 ntBASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 BX088651.1-201ENST00000540551 451 ntBASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 AC112777.1-201ENST00000540175 1423 ntBASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CBWD3Q5JTY5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 CR769767.2-201ENST00000622735 460 ntBASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBWD3Q5JTY5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CBWD3Q5JTY5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CBWD3Q5JTY5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CBWD3Q5JTY5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CBWD3Q5JTY5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBWD3Q5JTY5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.14■□□□□ 0.81
CBWD3Q5JTY5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBWD3Q5JTY5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms