Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.89■□□□□ 0.45
PIF1Q9H611 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.89■□□□□ 0.45
PIF1Q9H611 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.89■□□□□ 0.45
PIF1Q9H611 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.89■□□□□ 0.45
PIF1Q9H611 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PIF1Q9H611 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PIF1Q9H611 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.89■□□□□ 0.45
PIF1Q9H611 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PIF1Q9H611 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.88■□□□□ 0.45
PIF1Q9H611 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PIF1Q9H611 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.88■□□□□ 0.45
PIF1Q9H611 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.88■□□□□ 0.45
PIF1Q9H611 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.88■□□□□ 0.45
PIF1Q9H611 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.88■□□□□ 0.45
PIF1Q9H611 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.88■□□□□ 0.45
PIF1Q9H611 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PIF1Q9H611 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PIF1Q9H611 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.88■□□□□ 0.45
PIF1Q9H611 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.88■□□□□ 0.45
PIF1Q9H611 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PIF1Q9H611 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PIF1Q9H611 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.87■□□□□ 0.45
PIF1Q9H611 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PIF1Q9H611 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 AC060766.5-201ENST00000590539 871 ntBASIC17.87■□□□□ 0.45
PIF1Q9H611 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.87■□□□□ 0.45
PIF1Q9H611 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.87■□□□□ 0.45
PIF1Q9H611 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.87■□□□□ 0.45
PIF1Q9H611 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.87■□□□□ 0.45
PIF1Q9H611 AL499627.1-201ENST00000569373 2188 ntBASIC17.87■□□□□ 0.45
PIF1Q9H611 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
PIF1Q9H611 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PIF1Q9H611 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PIF1Q9H611 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PIF1Q9H611 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.87■□□□□ 0.45
PIF1Q9H611 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PIF1Q9H611 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.87■□□□□ 0.45
PIF1Q9H611 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PIF1Q9H611 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PIF1Q9H611 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.86■□□□□ 0.45
PIF1Q9H611 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PIF1Q9H611 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.86■□□□□ 0.45
PIF1Q9H611 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PIF1Q9H611 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
PIF1Q9H611 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PIF1Q9H611 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.86■□□□□ 0.45
PIF1Q9H611 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.86■□□□□ 0.45
PIF1Q9H611 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
PIF1Q9H611 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.86■□□□□ 0.45
PIF1Q9H611 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 SOX15-203ENST00000570788 1093 ntBASIC17.86■□□□□ 0.45
PIF1Q9H611 AC083880.1-201ENST00000608266 535 ntBASIC17.86■□□□□ 0.45
PIF1Q9H611 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PIF1Q9H611 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.86■□□□□ 0.45
PIF1Q9H611 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 AC012313.1-201ENST00000593393 3059 ntBASIC17.86■□□□□ 0.45
PIF1Q9H611 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms