Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
AP1S3Q96PC3 NORAD-201ENST00000565493 5339 ntBASIC14.15□□□□□ -0.14
AP1S3Q96PC3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.15□□□□□ -0.15
AP1S3Q96PC3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.14□□□□□ -0.15
AP1S3Q96PC3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S3Q96PC3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 AL161938.1-201ENST00000569833 2180 ntBASIC14.13□□□□□ -0.15
AP1S3Q96PC3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP1S3Q96PC3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 CROCCP3-202ENST00000420820 1947 ntBASIC14.12□□□□□ -0.15
AP1S3Q96PC3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 AL589743.5-201ENST00000616611 1050 ntBASIC14.12□□□□□ -0.15
AP1S3Q96PC3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 AC141586.3-201ENST00000562166 1838 ntBASIC14.12□□□□□ -0.15
AP1S3Q96PC3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
AP1S3Q96PC3 TNRC18P3-201ENST00000441896 2691 ntBASIC14.12□□□□□ -0.15
AP1S3Q96PC3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms