Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AC004911.1-201ENST00000416316 871 ntBASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
NSMCE2Q96MF7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 GNAS-203ENST00000306120 1878 ntBASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 DUSP5P2-201ENST00000426873 1033 ntBASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.67■□□□□ 0.42
NSMCE2Q96MF7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 AL499627.1-201ENST00000569373 2188 ntBASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 AL121829.2-201ENST00000620908 328 ntBASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 AC135776.1-201ENST00000319817 2481 ntBASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NSMCE2Q96MF7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NSMCE2Q96MF7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
NSMCE2Q96MF7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.64■□□□□ 0.42
NSMCE2Q96MF7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.64■□□□□ 0.42
NSMCE2Q96MF7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.64■□□□□ 0.42
NSMCE2Q96MF7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms