Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.13■□□□□ 0.81
BEST2Q8NFU1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 STARP1-201ENST00000397973 869 ntBASIC20.12■□□□□ 0.81
BEST2Q8NFU1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 AC034232.1-201ENST00000506026 1064 ntBASIC20.12■□□□□ 0.81
BEST2Q8NFU1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BEST2Q8NFU1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 HOXB1-202ENST00000577092 1414 ntBASIC20.11■□□□□ 0.81
BEST2Q8NFU1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
BEST2Q8NFU1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 KRT18P38-201ENST00000449496 1282 ntBASIC20.1■□□□□ 0.81
BEST2Q8NFU1 SEC1P-202ENST00000473944 940 ntBASIC20.1■□□□□ 0.81
BEST2Q8NFU1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 AL357033.4-201ENST00000617703 1807 ntBASIC20.1■□□□□ 0.81
BEST2Q8NFU1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.1■□□□□ 0.81
BEST2Q8NFU1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST2Q8NFU1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST2Q8NFU1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BEST2Q8NFU1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BEST2Q8NFU1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms