Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 PCDHA12-202ENST00000613593 2588 ntBASIC16.7■□□□□ 0.26
CDRT1O95170 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.7■□□□□ 0.26
CDRT1O95170 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 SIRPAP1-201ENST00000448467 1770 ntBASIC16.7■□□□□ 0.26
CDRT1O95170 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.7■□□□□ 0.26
CDRT1O95170 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDRT1O95170 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.7■□□□□ 0.26
CDRT1O95170 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.7■□□□□ 0.26
CDRT1O95170 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 MIR5787-201ENST00000611784 55 ntBASIC16.7■□□□□ 0.26
CDRT1O95170 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.7■□□□□ 0.26
CDRT1O95170 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDRT1O95170 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDRT1O95170 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.69■□□□□ 0.26
CDRT1O95170 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
CDRT1O95170 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.69■□□□□ 0.26
CDRT1O95170 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.69■□□□□ 0.26
CDRT1O95170 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.69■□□□□ 0.26
CDRT1O95170 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.69■□□□□ 0.26
CDRT1O95170 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDRT1O95170 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CDRT1O95170 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.69■□□□□ 0.26
CDRT1O95170 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDRT1O95170 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.69■□□□□ 0.26
CDRT1O95170 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.69■□□□□ 0.26
CDRT1O95170 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDRT1O95170 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDRT1O95170 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.69■□□□□ 0.26
CDRT1O95170 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDRT1O95170 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.68■□□□□ 0.26
CDRT1O95170 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.68■□□□□ 0.26
CDRT1O95170 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.68■□□□□ 0.26
CDRT1O95170 AC133552.2-202ENST00000575694 574 ntBASIC16.68■□□□□ 0.26
CDRT1O95170 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDRT1O95170 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDRT1O95170 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.68■□□□□ 0.26
CDRT1O95170 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.68■□□□□ 0.26
CDRT1O95170 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CDRT1O95170 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.68■□□□□ 0.26
CDRT1O95170 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CDRT1O95170 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDRT1O95170 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.67■□□□□ 0.26
CDRT1O95170 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 BX276092.2-201ENST00000417668 665 ntBASIC16.67■□□□□ 0.26
CDRT1O95170 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.67■□□□□ 0.26
CDRT1O95170 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDRT1O95170 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms