Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TSPAN4O14817 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TSPAN4O14817 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
TSPAN4O14817 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TSPAN4O14817 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TSPAN4O14817 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.72■□□□□ 0.11
TSPAN4O14817 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.72■□□□□ 0.11
TSPAN4O14817 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.72■□□□□ 0.11
TSPAN4O14817 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.72■□□□□ 0.11
TSPAN4O14817 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.72■□□□□ 0.11
TSPAN4O14817 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.72■□□□□ 0.11
TSPAN4O14817 AC092666.2-201ENST00000613287 246 ntBASIC15.72■□□□□ 0.11
TSPAN4O14817 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.72■□□□□ 0.11
TSPAN4O14817 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TSPAN4O14817 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TSPAN4O14817 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TSPAN4O14817 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TSPAN4O14817 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.71■□□□□ 0.11
TSPAN4O14817 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TSPAN4O14817 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TSPAN4O14817 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.71■□□□□ 0.11
TSPAN4O14817 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.71■□□□□ 0.11
TSPAN4O14817 AC245052.3-201ENST00000450182 901 ntBASIC15.71■□□□□ 0.11
TSPAN4O14817 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.71■□□□□ 0.11
TSPAN4O14817 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.71■□□□□ 0.11
TSPAN4O14817 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.71■□□□□ 0.11
TSPAN4O14817 IKBKGP1-201ENST00000612193 1073 ntBASIC15.71■□□□□ 0.11
TSPAN4O14817 AC092437.1-201ENST00000624794 1048 ntBASIC15.71■□□□□ 0.11
TSPAN4O14817 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.71■□□□□ 0.11
TSPAN4O14817 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
TSPAN4O14817 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TSPAN4O14817 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TSPAN4O14817 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TSPAN4O14817 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TSPAN4O14817 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TSPAN4O14817 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TSPAN4O14817 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TSPAN4O14817 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
TSPAN4O14817 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TSPAN4O14817 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TSPAN4O14817 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TSPAN4O14817 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 AL136379.1-201ENST00000623471 2642 ntBASIC15.7■□□□□ 0.1
TSPAN4O14817 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TSPAN4O14817 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.7■□□□□ 0.1
TSPAN4O14817 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
TSPAN4O14817 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TSPAN4O14817 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TSPAN4O14817 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.7■□□□□ 0.1
TSPAN4O14817 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.7■□□□□ 0.1
TSPAN4O14817 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.7■□□□□ 0.1
TSPAN4O14817 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TSPAN4O14817 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.7■□□□□ 0.1
TSPAN4O14817 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.7■□□□□ 0.1
TSPAN4O14817 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TSPAN4O14817 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms