Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 MTMR9LP-203ENST00000426597 1545 ntBASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 AC087623.3-201ENST00000607047 1098 ntBASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SMIM1B2RUZ4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 MIR6821-201ENST00000617625 74 ntBASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 RCC2P6-201ENST00000526625 1557 ntBASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 AC138028.4-201ENST00000564984 1845 ntBASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM1B2RUZ4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 AC012313.1-201ENST00000593393 3059 ntBASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 AC093677.2-201ENST00000600169 1863 ntBASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SMIM1B2RUZ4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms