Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.18■□□□□ 0.18
MRPS28Q9Y2Q9 NOC2LP2-201ENST00000407594 1944 ntBASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 HEIH-201ENST00000623091 1652 ntBASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPS28Q9Y2Q9 PKD1P1-201ENST00000458669 6805 ntBASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 AL109923.1-201ENST00000618799 583 ntBASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPS28Q9Y2Q9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 RCC2P6-201ENST00000526625 1557 ntBASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
MRPS28Q9Y2Q9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
MRPS28Q9Y2Q9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
MRPS28Q9Y2Q9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.14■□□□□ 0.18
MRPS28Q9Y2Q9 KRT8P41-201ENST00000533985 1514 ntBASIC16.14■□□□□ 0.18
MRPS28Q9Y2Q9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPS28Q9Y2Q9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPS28Q9Y2Q9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MRPS28Q9Y2Q9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPS28Q9Y2Q9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.14■□□□□ 0.17
MRPS28Q9Y2Q9 AL162741.1-201ENST00000565563 1558 ntBASIC16.14■□□□□ 0.17
MRPS28Q9Y2Q9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.14■□□□□ 0.17
MRPS28Q9Y2Q9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms