Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 POLR2E-209ENST00000591767 1214 ntTSL 227.47■■□□□ 1.991e-6■■□□□ 13.7
DROSHAQ9NRR4 SPPL2B-214ENST00000622308 749 ntTSL 1 (best)27.43■■□□□ 1.989e-7■■□□□ 13.7
DROSHAQ9NRR4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC26.98■■□□□ 1.913e-7■■□□□ 13.7
DROSHAQ9NRR4 SLC29A2-204ENST00000541567 2272 ntTSL 1 (best)26.71■■□□□ 1.871e-8■■□□□ 13.7
DROSHAQ9NRR4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.761e-6■■□□□ 13.7
DROSHAQ9NRR4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.671e-8■■□□□ 13.7
DROSHAQ9NRR4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC25.38■■□□□ 1.656e-6■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-201ENST00000215587 1286 ntTSL 325.19■■□□□ 1.621e-6■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-210ENST00000592597 440 ntTSL 225.09■■□□□ 1.611e-6■■□□□ 13.7
DROSHAQ9NRR4 TMEM184B-208ENST00000466117 542 ntTSL 424.8■■□□□ 1.569e-7■■□□□ 13.7
DROSHAQ9NRR4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.551e-8■■□□□ 13.7
DROSHAQ9NRR4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.551e-8■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-212ENST00000614705 589 ntTSL 424.57■■□□□ 1.521e-6■■□□□ 13.7
DROSHAQ9NRR4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC24.52■■□□□ 1.523e-7■■□□□ 13.7
DROSHAQ9NRR4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.459e-7■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-206ENST00000589737 1105 ntTSL 224.01■■□□□ 1.431e-6■■□□□ 13.7
DROSHAQ9NRR4 FLOT2-204ENST00000577789 2503 ntTSL 523.9■■□□□ 1.421e-6■■□□□ 13.7
DROSHAQ9NRR4 FLOT2-206ENST00000580805 2679 ntTSL 523.67■■□□□ 1.381e-6■■□□□ 13.7
DROSHAQ9NRR4 SLC29A2-203ENST00000540386 2474 ntTSL 1 (best)23.56■■□□□ 1.361e-8■■□□□ 13.7
DROSHAQ9NRR4 PUF60-212ENST00000528320 922 ntTSL 223.42■■□□□ 1.349e-7■■□□□ 13.7
DROSHAQ9NRR4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC23.18■■□□□ 1.31e-8■■□□□ 13.7
DROSHAQ9NRR4 CTIF-203ENST00000587752 683 ntTSL 523.17■■□□□ 1.39e-7■■□□□ 13.7
DROSHAQ9NRR4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC23.16■■□□□ 1.33e-7■■□□□ 13.7
DROSHAQ9NRR4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC22.52■■□□□ 1.21e-6■■□□□ 13.7
DROSHAQ9NRR4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.151e-8■■□□□ 13.7
DROSHAQ9NRR4 TP73-AS1-209ENST00000636630 2529 ntTSL 521.9■■□□□ 1.16e-6■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.071e-6■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.031e-6■■□□□ 13.7
DROSHAQ9NRR4 IPO7-206ENST00000533233 578 ntTSL 421.37■■□□□ 1.019e-7■■□□□ 13.7
DROSHAQ9NRR4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 19e-7■■□□□ 13.7
DROSHAQ9NRR4 TMEM184B-204ENST00000411679 555 ntTSL 521.32■■□□□ 19e-7■■□□□ 13.7
DROSHAQ9NRR4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21.06■□□□□ 0.961e-8■■□□□ 13.7
DROSHAQ9NRR4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC20.76■□□□□ 0.911e-8■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.911e-6■■□□□ 13.7
DROSHAQ9NRR4 CTIF-210ENST00000591412 491 ntTSL 320.68■□□□□ 0.99e-7■■□□□ 13.7
DROSHAQ9NRR4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.871e-6■■□□□ 13.7
DROSHAQ9NRR4 PCNT-208ENST00000490468 1415 ntTSL 520.36■□□□□ 0.859e-7■■□□□ 13.7
DROSHAQ9NRR4 NUMB-225ENST00000557031 567 ntTSL 420.33■□□□□ 0.847e-14■■□□□ 13.7
DROSHAQ9NRR4 TMEM184B-206ENST00000457534 555 ntTSL 520.08■□□□□ 0.819e-7■■□□□ 13.7
DROSHAQ9NRR4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.739e-7■■□□□ 13.7
DROSHAQ9NRR4 FLOT2-211ENST00000586827 1069 ntTSL 519.33■□□□□ 0.691e-6■■□□□ 13.7
DROSHAQ9NRR4 TP73-AS1-205ENST00000587071 737 ntTSL 419.02■□□□□ 0.646e-6■■□□□ 13.7
DROSHAQ9NRR4 IPO7-208ENST00000630083 195 ntTSL 5 BASIC18.8■□□□□ 0.69e-7■■□□□ 13.7
DROSHAQ9NRR4 TMEM184B-205ENST00000436674 3667 ntTSL 1 (best)18.68■□□□□ 0.589e-7■■□□□ 13.7
DROSHAQ9NRR4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.561e-8■■□□□ 13.7
DROSHAQ9NRR4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.549e-7■■□□□ 13.7
DROSHAQ9NRR4 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.529e-7■■□□□ 13.7
DROSHAQ9NRR4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.461e-8■■□□□ 13.7
DROSHAQ9NRR4 TP73-AS1-204ENST00000452079 6358 ntTSL 1 (best)17.64■□□□□ 0.416e-6■■□□□ 13.7
DROSHAQ9NRR4 TP73-AS1-201ENST00000418088 3329 ntTSL 1 (best)17.56■□□□□ 0.46e-6■■□□□ 13.7
DROSHAQ9NRR4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.361e-8■■□□□ 13.7
DROSHAQ9NRR4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.363e-7■■□□□ 13.7
DROSHAQ9NRR4 AP2A2-217ENST00000529818 549 ntTSL 416.72■□□□□ 0.271e-11■■□□□ 13.7
DROSHAQ9NRR4 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC16.64■□□□□ 0.259e-7■■□□□ 13.7
DROSHAQ9NRR4 COPS6-208ENST00000474823 752 ntTSL 216.04■□□□□ 0.169e-7■■□□□ 13.7
DROSHAQ9NRR4 POLR2E-202ENST00000585838 487 ntTSL 515.95■□□□□ 0.141e-6■■□□□ 13.7
DROSHAQ9NRR4 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 09e-7■■□□□ 13.7
DROSHAQ9NRR4 PUF60-210ENST00000527584 547 ntTSL 214.6□□□□□ -0.079e-7■■□□□ 13.7
DROSHAQ9NRR4 SRI-209ENST00000489079 557 ntTSL 314.22□□□□□ -0.131e-8■■□□□ 13.7
DROSHAQ9NRR4 COPS6-204ENST00000426712 716 ntTSL 314.08□□□□□ -0.169e-7■■□□□ 13.7
DROSHAQ9NRR4 TPD52L2-208ENST00000474176 4053 ntTSL 213.35□□□□□ -0.274e-6■■□□□ 13.7
DROSHAQ9NRR4 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.339e-7■■□□□ 13.7
DROSHAQ9NRR4 SRI-204ENST00000431660 1418 ntTSL 2 BASIC12.93□□□□□ -0.341e-8■■□□□ 13.7
DROSHAQ9NRR4 PCNT-205ENST00000480896 10485 ntTSL 1 (best)12.27□□□□□ -0.459e-7■■□□□ 13.7
DROSHAQ9NRR4 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.59e-7■■□□□ 13.7
DROSHAQ9NRR4 SRI-202ENST00000394641 653 ntTSL 2 BASIC11.85□□□□□ -0.511e-8■■□□□ 13.7
DROSHAQ9NRR4 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.553e-7■■□□□ 13.7
DROSHAQ9NRR4 SRI-207ENST00000486860 1024 ntTSL 1 (best)9.53□□□□□ -0.881e-8■■□□□ 13.7
DROSHAQ9NRR4 COPS6-209ENST00000483891 734 ntTSL 39.32□□□□□ -0.929e-7■■□□□ 13.7
DROSHAQ9NRR4 RNF217-206ENST00000454842 545 ntTSL 47.71□□□□□ -1.179e-7■■□□□ 13.7
DROSHAQ9NRR4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.48□□□□□ -1.219e-7■■□□□ 13.7
DROSHAQ9NRR4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.48□□□□□ -1.219e-7■■□□□ 13.7
DROSHAQ9NRR4 SRI-208ENST00000488015 588 ntTSL 27.4□□□□□ -1.221e-8■■□□□ 13.7
DROSHAQ9NRR4 RNF217-207ENST00000519565 10660 ntTSL 55.83□□□□□ -1.489e-7■■□□□ 13.7
DROSHAQ9NRR4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.97□□□□□ -1.771e-8■■□□□ 13.7
DROSHAQ9NRR4 RNF217-208ENST00000519799 450 ntTSL 41.19□□□□□ -2.229e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-220ENST00000622587 802 ntTSL 528.46■■■□□ 2.152e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.12e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-215ENST00000546172 869 ntTSL 527.67■■■□□ 2.022e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-212ENST00000540530 1707 ntTSL 227.02■■□□□ 1.922e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC26.91■■□□□ 1.92e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-213ENST00000543289 3356 ntTSL 225.38■■□□□ 1.652e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC24.03■■□□□ 1.442e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC24.03■■□□□ 1.442e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-205ENST00000534853 745 ntTSL 523.82■■□□□ 1.42e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC19.86■□□□□ 0.772e-7■■□□□ 13.7
DROSHAQ9NRR4 NDUFS7-214ENST00000545446 3089 ntTSL 218.22■□□□□ 0.512e-7■■□□□ 13.7
DROSHAQ9NRR4 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.369e-8■■□□□ 13.7
DROSHAQ9NRR4 ABO-201ENST00000453660 6341 ntTSL 1 (best)14.61□□□□□ -0.077e-7■■□□□ 13.7
DROSHAQ9NRR4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC31.9■■■□□ 2.73e-7■■□□□ 13.7
DROSHAQ9NRR4 UBE2I-215ENST00000567074 884 ntTSL 1 (best)29.77■■■□□ 2.363e-7■■□□□ 13.7
DROSHAQ9NRR4 UBE2I-212ENST00000566159 2642 nt22.48■■□□□ 1.193e-7■■□□□ 13.7
DROSHAQ9NRR4 UBE2I-214ENST00000566775 396 ntTSL 313.67□□□□□ -0.223e-7■■□□□ 13.7
DROSHAQ9NRR4 PFKFB4-214ENST00000490404 849 ntTSL 314.88□□□□□ -0.037e-12■■□□□ 13.7
DROSHAQ9NRR4 HNRNPL-214ENST00000601813 593 ntTSL 520.88■□□□□ 0.932e-6■■□□□ 13.6
DROSHAQ9NRR4 MICALL2-206ENST00000470807 668 ntTSL 326.13■■□□□ 1.776e-7■■□□□ 13.6
DROSHAQ9NRR4 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.946e-10■■□□□ 13.6
DROSHAQ9NRR4 TUBA1B-201ENST00000332858 3198 ntTSL 1 (best)19.3■□□□□ 0.686e-10■■□□□ 13.6
DROSHAQ9NRR4 TUBA1B-204ENST00000547765 1875 ntTSL 519.24■□□□□ 0.676e-10■■□□□ 13.6
DROSHAQ9NRR4 TUBA1B-203ENST00000547476 584 ntTSL 419.16■□□□□ 0.666e-10■■□□□ 13.6
Retrieved 100 of 16,331 protein–RNA pairs in 102.5 ms