RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
COPS6-208ENST00000474823 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
COPS6-208ENST00000474823 ABCC9O60706 1549 aa21.7■■□□□ 1.06
COPS6-208ENST00000474823 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
COPS6-208ENST00000474823 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
COPS6-208ENST00000474823 NACADO15069 1562 aa20.94■□□□□ 0.94
COPS6-208ENST00000474823 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
COPS6-208ENST00000474823 MYO15BQ96JP2 1530 aa20.84■□□□□ 0.93
COPS6-208ENST00000474823 DCAF1Q9Y4B6 1507 aa20.81■□□□□ 0.92
COPS6-208ENST00000474823 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.86
COPS6-208ENST00000474823 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
COPS6-208ENST00000474823 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
COPS6-208ENST00000474823 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
COPS6-208ENST00000474823 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
COPS6-208ENST00000474823 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
COPS6-208ENST00000474823 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
COPS6-208ENST00000474823 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
COPS6-208ENST00000474823 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
COPS6-208ENST00000474823 BAZ1AQ9NRL2 1556 aaPredicted RBP19.5■□□□□ 0.71
COPS6-208ENST00000474823 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
COPS6-208ENST00000474823 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
COPS6-208ENST00000474823 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
COPS6-208ENST00000474823 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
COPS6-208ENST00000474823 NCAPD3P42695 1498 aa19.32■□□□□ 0.68
COPS6-208ENST00000474823 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.67
COPS6-208ENST00000474823 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
COPS6-208ENST00000474823 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
COPS6-208ENST00000474823 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
COPS6-208ENST00000474823 WIZO95785 1651 aa19.17■□□□□ 0.66
COPS6-208ENST00000474823 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
COPS6-208ENST00000474823 SUPT5HO00267 1087 aaKnown RBP18.92■□□□□ 0.62
COPS6-208ENST00000474823 NESP48681 1621 aa18.8■□□□□ 0.6
COPS6-208ENST00000474823 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
COPS6-208ENST00000474823 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
COPS6-208ENST00000474823 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.59
COPS6-208ENST00000474823 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
COPS6-208ENST00000474823 PDS5BQ9NTI5 1447 aa18.69■□□□□ 0.58
COPS6-208ENST00000474823 CFTRP13569 1480 aa18.68■□□□□ 0.58
COPS6-208ENST00000474823 FANCD2Q9BXW9 1451 aa18.57■□□□□ 0.56
COPS6-208ENST00000474823 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
COPS6-208ENST00000474823 CEP164Q9UPV0 1460 aa18.53■□□□□ 0.56
COPS6-208ENST00000474823 PRDM2Q13029 1718 aa18.52■□□□□ 0.55
COPS6-208ENST00000474823 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
COPS6-208ENST00000474823 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
COPS6-208ENST00000474823 CUX2O14529 1486 aa18.45■□□□□ 0.54
COPS6-208ENST00000474823 WDR62O43379 1518 aa18.38■□□□□ 0.53
COPS6-208ENST00000474823 URB2Q14146 1524 aaKnown RBP18.33■□□□□ 0.53
COPS6-208ENST00000474823 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
COPS6-208ENST00000474823 TOPBP1Q92547 1522 aa18.27■□□□□ 0.51
COPS6-208ENST00000474823 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
COPS6-208ENST00000474823 CUX1P39880 1505 aa18.17■□□□□ 0.5
COPS6-208ENST00000474823 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
COPS6-208ENST00000474823 IFT140Q96RY7 1462 aa18.14■□□□□ 0.5
COPS6-208ENST00000474823 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
COPS6-208ENST00000474823 FGD5Q6ZNL6 1462 aa18.11■□□□□ 0.49
COPS6-208ENST00000474823 SOGA1O94964 1423 aa18.08■□□□□ 0.49
COPS6-208ENST00000474823 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
COPS6-208ENST00000474823 SYNJ1O43426 1573 aa18.05■□□□□ 0.48
COPS6-208ENST00000474823 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
COPS6-208ENST00000474823 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
COPS6-208ENST00000474823 TARBP1Q13395 1621 aaKnown RBP18.03■□□□□ 0.48
COPS6-208ENST00000474823 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
COPS6-208ENST00000474823 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.463e-14■■■■■ 70.9
COPS6-208ENST00000474823 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
COPS6-208ENST00000474823 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
COPS6-208ENST00000474823 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
COPS6-208ENST00000474823 WDR97A6NE52 1622 aa17.92■□□□□ 0.46
COPS6-208ENST00000474823 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
COPS6-208ENST00000474823 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
COPS6-208ENST00000474823 GRIN2BQ13224 1484 aa17.85■□□□□ 0.45
COPS6-208ENST00000474823 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.44
COPS6-208ENST00000474823 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
COPS6-208ENST00000474823 PBRM1Q86U86 1689 aa17.78■□□□□ 0.44
COPS6-208ENST00000474823 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
COPS6-208ENST00000474823 FBLN2P98095 1184 aa17.78■□□□□ 0.44
COPS6-208ENST00000474823 KIF27Q86VH2 1401 aa17.78■□□□□ 0.44
COPS6-208ENST00000474823 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
COPS6-208ENST00000474823 CHMP7Q8WUX9 453 aaPredicted RBP17.74■□□□□ 0.43
COPS6-208ENST00000474823 ERICH3Q5RHP9 1530 aa17.73■□□□□ 0.43
COPS6-208ENST00000474823 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
COPS6-208ENST00000474823 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
COPS6-208ENST00000474823 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
COPS6-208ENST00000474823 CHD1O14646 1710 aa17.69■□□□□ 0.42
COPS6-208ENST00000474823 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
COPS6-208ENST00000474823 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
COPS6-208ENST00000474823 IGF1RP08069 1367 aa17.66■□□□□ 0.42
COPS6-208ENST00000474823 GRIN2AQ12879 1464 aa17.6■□□□□ 0.41
COPS6-208ENST00000474823 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
COPS6-208ENST00000474823 CUL7Q14999 1698 aa17.59■□□□□ 0.41
COPS6-208ENST00000474823 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.4
COPS6-208ENST00000474823 EEA1Q15075 1411 aa17.53■□□□□ 0.4
COPS6-208ENST00000474823 NUP160Q12769 1436 aa17.51■□□□□ 0.39
COPS6-208ENST00000474823 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
COPS6-208ENST00000474823 CLASP1Q7Z460 1538 aa17.49■□□□□ 0.39
COPS6-208ENST00000474823 FAM9AQ8IZU1 332 aaPredicted RBP17.49■□□□□ 0.39
COPS6-208ENST00000474823 CEP170Q5SW79 1584 aa17.49■□□□□ 0.39
COPS6-208ENST00000474823 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
COPS6-208ENST00000474823 PRXQ9BXM0 1461 aa17.43■□□□□ 0.38
COPS6-208ENST00000474823 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
COPS6-208ENST00000474823 KIAA0586Q9BVV6 1533 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms