Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 PRSS44-201ENST00000515154 1146 ntBASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 AL445675.2-201ENST00000620291 557 ntBASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SLC52A3Q9NQ40 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC52A3Q9NQ40 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC52A3Q9NQ40 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC52A3Q9NQ40 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC52A3Q9NQ40 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC52A3Q9NQ40 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC52A3Q9NQ40 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 AC004980.1-204ENST00000429707 299 ntBASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC52A3Q9NQ40 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 KRT16P5-201ENST00000455284 522 ntBASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 AC069544.1-201ENST00000609399 999 ntBASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC52A3Q9NQ40 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 HLA-L-209ENST00000420110 1011 ntBASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 KRT18P41-201ENST00000518924 1277 ntBASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms