Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 AC005332.1-201ENST00000577698 1310 ntBASIC21.22■□□□□ 0.99
RETREG2Q8NC44 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 AL138781.2-201ENST00000617896 1843 ntBASIC21.21■□□□□ 0.99
RETREG2Q8NC44 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 AC116407.4-201ENST00000623319 1061 ntBASIC21.21■□□□□ 0.99
RETREG2Q8NC44 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 KRT8P45-201ENST00000414328 1447 ntBASIC21.21■□□□□ 0.99
RETREG2Q8NC44 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RETREG2Q8NC44 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.2■□□□□ 0.99
RETREG2Q8NC44 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 HCG4P8-203ENST00000443049 980 ntBASIC21.2■□□□□ 0.98
RETREG2Q8NC44 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 VENTXP5-201ENST00000523979 775 ntBASIC21.2■□□□□ 0.98
RETREG2Q8NC44 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RETREG2Q8NC44 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 AC069148.1-201ENST00000608741 768 ntBASIC21.19■□□□□ 0.98
RETREG2Q8NC44 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.19■□□□□ 0.98
RETREG2Q8NC44 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RETREG2Q8NC44 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RETREG2Q8NC44 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms