Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.32■□□□□ 0.04
LRTM2Q8N967 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM2Q8N967 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM2Q8N967 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM2Q8N967 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM2Q8N967 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM2Q8N967 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM2Q8N967 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM2Q8N967 KRT8P32-201ENST00000512863 1461 ntBASIC15.32■□□□□ 0.04
LRTM2Q8N967 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM2Q8N967 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRTM2Q8N967 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 AC008556.1-201ENST00000610908 2040 ntBASIC15.31■□□□□ 0.04
LRTM2Q8N967 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 AC090340.1-201ENST00000620778 4980 ntBASIC15.31■□□□□ 0.04
LRTM2Q8N967 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 KRT18P5-201ENST00000436075 1291 ntBASIC15.31■□□□□ 0.04
LRTM2Q8N967 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRTM2Q8N967 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM2Q8N967 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 BX276092.2-201ENST00000417668 665 ntBASIC15.3■□□□□ 0.04
LRTM2Q8N967 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.3■□□□□ 0.04
LRTM2Q8N967 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM2Q8N967 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM2Q8N967 AC009053.2-201ENST00000563701 2365 ntBASIC15.29■□□□□ 0.04
LRTM2Q8N967 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRTM2Q8N967 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRTM2Q8N967 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms